Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007059.1 Hibiscus syriacus cultivar Beakdansim tig00018314_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77969

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
317--360
2
22.5
2
95
4
81
50
0
0
50
1.00
1228--1371
64
2.2
65
86
4
202
38
5
8
47
1.57
1723--1796
23
3.2
22
78
14
60
21
12
14
51
1.75
6284--6461
96
1.8
97
87
8
270
39
5
8
46
1.57
6420--6467
18
2.6
18
83
6
60
16
4
6
72
1.20
9197--9253
2
28.5
2
96
0
105
49
0
0
50
1.00
16460--16506
11
4.5
10
80
17
51
63
4
4
27
1.31
26619--26729
51
2.2
51
90
6
174
26
26
20
27
1.99
32354--32580
110
2.1
111
91
0
366
46
9
8
35
1.67
32698--32738
10
4.1
10
84
12
57
39
0
29
31
1.57
32849--32975
51
2.5
50
87
1
164
18
29
34
16
1.93
40788--40840
22
2.4
22
87
6
72
24
28
20
26
1.99
49417--49451
15
2.3
15
100
0
70
48
14
20
17
1.81
51937--52029
46
2.0
46
87
0
132
37
5
20
36
1.76
62631--62683
22
2.4
23
81
6
65
58
0
1
39
1.09
71807--71877
30
2.3
32
85
11
112
59
7
12
21
1.57
74918--74957
2
20.0
2
94
0
71
47
0
2
50
1.14
76490--76563
26
2.9
25
92
6
121
33
4
14
47
1.64

Tables:   1

The End!