Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007060.1 Hibiscus syriacus cultivar Beakdansim tig00018327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78347

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7864--8049
88
2.1
88
83
6
234
27
15
5
51
1.66
9040--9077
19
2.0
19
94
0
67
47
7
0
44
1.32
12995--13032
20
1.9
20
94
0
67
39
21
7
31
1.82
21269--21356
29
3.0
29
100
0
176
23
13
13
48
1.78
23860--23897
19
2.0
19
89
0
58
47
10
0
42
1.38
29457--29500
22
1.9
24
86
9
65
54
6
0
38
1.27
30303--30345
22
2.0
22
95
0
77
41
6
4
46
1.51
35920--35970
24
2.2
24
89
3
77
43
23
15
17
1.88
37252--37429
89
2.0
89
88
6
263
43
13
14
28
1.83
44407--44544
36
3.8
36
95
0
240
28
5
36
30
1.79
49360--49396
19
1.9
19
100
0
74
86
5
8
0
0.70
50618--50695
32
2.4
32
100
0
156
25
30
21
21
1.98
51849--51901
27
2.0
26
89
10
81
28
9
0
62
1.26
59243--60192
239
4.0
240
93
1
1559
34
18
14
32
1.90
59243--60192
479
2.0
478
93
1
1607
34
18
14
32
1.90
67719--68035
115
2.6
119
80
11
315
42
7
4
44
1.54
71701--71747
3
16.3
3
79
16
55
72
0
0
27
0.85
71707--71749
22
2.0
22
86
9
61
74
0
0
25
0.82
74589--74618
16
1.9
16
93
6
53
70
0
0
30
0.88
75718--75792
31
2.4
31
90
0
114
26
13
12
48
1.77
75960--76039
31
2.6
31
85
0
106
22
12
15
50
1.77

Tables:   1

The End!