Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007065.1 Hibiscus syriacus cultivar Beakdansim tig00018354_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56184

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4940--4985
21
2.2
21
96
0
83
21
17
10
50
1.77
8316--8359
22
2.0
22
82
8
54
31
9
9
50
1.65
12139--12215
41
1.9
40
83
2
100
19
16
2
61
1.46
19059--19093
4
8.5
4
93
6
61
48
25
0
25
1.51
19457--19522
18
3.6
18
78
8
69
30
27
19
22
1.98
19456--19532
38
2.0
38
89
0
118
29
27
19
23
1.98
19475--19532
18
3.0
20
75
10
66
29
25
22
22
1.99
37593--37691
30
3.3
28
78
12
90
35
6
14
44
1.69
37614--37680
29
2.2
29
84
5
80
34
7
16
41
1.76
42613--42722
50
2.2
50
88
0
157
13
31
28
26
1.94
48339--48381
19
2.3
19
79
0
50
65
2
16
16
1.38

Tables:   1

The End!