Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007067.1 Hibiscus syriacus cultivar Beakdansim tig00018362_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62695

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1869--1929
32
1.9
32
83
6
79
26
19
19
34
1.96
11926--11976
25
2.0
27
85
14
72
35
1
11
50
1.50
12152--12184
17
2.1
16
88
11
50
42
0
0
57
0.98
12150--12208
22
2.6
23
81
10
77
45
0
0
54
0.99
15232--15266
18
1.9
18
88
0
52
54
0
17
28
1.43
16414--16527
24
4.8
24
88
6
160
22
16
19
41
1.90
16466--16539
24
3.1
24
84
3
69
20
16
20
43
1.88
34401--34644
121
2.0
122
91
1
400
34
21
12
31
1.90
35709--35750
20
2.0
21
86
4
59
30
9
33
26
1.88
43030--43073
16
2.8
16
82
0
52
40
4
0
54
1.21
46365--46392
3
9.3
3
100
0
56
35
0
0
64
0.94
47931--47985
25
2.2
24
79
17
60
56
1
3
38
1.28
47947--47996
27
1.9
25
84
15
66
54
0
6
40
1.25
59577--59669
29
3.2
28
63
13
71
26
5
10
56
1.54
59547--59686
59
2.2
63
88
9
216
29
4
12
54
1.56

Tables:   1

The End!