Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007073.1 Hibiscus syriacus cultivar Beakdansim tig00018435_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69723

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2484--2538
21
2.6
21
82
0
83
0
36
14
49
1.44
6841--6873
16
2.1
16
94
0
57
21
12
9
57
1.62
8646--8702
20
2.8
20
76
15
53
63
5
1
29
1.27
15809--15879
35
2.0
35
81
5
81
35
14
21
29
1.92
19433--19503
34
2.1
34
89
2
108
23
29
15
30
1.95
19827--19867
20
2.0
21
90
4
66
21
26
26
24
2.00
19901--19946
20
2.3
20
88
7
67
30
21
13
34
1.91
20182--20239
21
3.0
19
78
14
73
51
8
10
29
1.65
20182--20239
18
3.1
18
77
20
64
51
8
10
29
1.65
22900--22970
34
2.1
33
87
7
99
25
28
15
30
1.96
23115--23159
21
2.1
21
91
0
72
15
22
15
46
1.83
25073--25102
9
3.4
9
95
4
53
16
0
33
50
1.46
25997--26046
21
2.4
21
100
0
100
50
24
6
20
1.70
29381--29410
15
1.9
16
93
6
53
26
23
30
20
1.98
32076--32111
18
2.0
18
100
0
72
27
22
16
33
1.95
32077--32120
18
2.4
18
92
0
70
27
25
15
31
1.96
32284--32308
13
1.9
13
100
0
50
48
8
4
40
1.51
32343--32605
90
2.9
90
96
0
474
44
7
11
37
1.68
39178--39214
18
2.1
18
100
0
74
35
16
10
37
1.83
43680--43731
20
2.6
20
75
6
52
28
30
9
30
1.89
57204--57301
44
2.2
44
83
1
126
29
16
23
30
1.96
59878--59932
21
2.6
21
82
0
83
0
36
14
49
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64271--64303
16
2.1
16
94
0
57
21
12
9
57
1.62
66078--66127
19
2.6
19
78
9
57
60
4
2
34
1.27

Tables:   1

The End!