Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007074.1 Hibiscus syriacus cultivar Beakdansim tig00018456_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62110

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2091--2127
14
2.5
15
83
16
51
32
0
5
62
1.18
2791--2858
34
2.0
35
82
8
86
51
1
1
45
1.19
3099--3128
2
15.0
2
100
0
60
50
0
0
50
1.00
11368--11440
35
2.1
35
97
0
137
32
21
16
28
1.95
11449--11541
29
3.1
29
61
11
71
33
20
13
32
1.92
11428--11548
60
2.0
60
100
0
242
30
23
13
33
1.93
18483--18686
72
2.8
72
83
5
270
34
15
21
28
1.94
26745--26847
29
3.6
28
82
10
120
41
12
9
35
1.76
26745--26847
28
3.6
27
83
11
118
41
12
9
35
1.76
29190--29228
19
2.1
19
85
0
51
51
2
7
38
1.44
29506--29610
32
3.4
30
79
7
95
54
1
2
40
1.26
29506--29600
30
3.1
30
80
8
95
53
2
2
42
1.24
30142--30491
176
2.0
176
99
0
691
24
18
24
33
1.97
30915--30948
2
17.0
2
100
0
68
50
0
0
50
1.00
43288--43325
19
2.0
19
100
0
76
47
10
26
15
1.78
54433--54605
60
2.9
59
80
9
181
42
4
19
34
1.70
55532--55629
30
3.1
30
78
17
108
44
10
9
35
1.70
55557--55628
35
2.1
36
86
5
103
51
9
8
30
1.64
57710--57823
60
1.9
60
80
8
135
43
7
20
28
1.77
59637--59673
14
2.6
14
100
0
74
21
27
37
13
1.91

Tables:   1

The End!