Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007075.1 Hibiscus syriacus cultivar Beakdansim tig00018463_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70376

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7030--7124
32
2.9
35
75
15
103
47
0
2
50
1.13
7089--7132
22
2.0
22
90
0
70
38
2
0
59
1.10
7100--7146
18
2.6
18
86
3
67
38
2
0
59
1.09
8459--8519
29
2.1
29
85
11
81
19
27
3
49
1.64
8674--8704
16
1.9
16
93
0
53
35
16
6
41
1.74
25836--25860
13
1.9
13
100
0
50
72
0
20
8
1.10
26869--26990
42
2.9
42
83
2
156
26
16
20
36
1.93
28632--29282
243
2.7
243
85
0
885
31
17
15
35
1.91
29108--29484
177
2.1
177
84
3
483
29
18
18
34
1.94
28873--29724
415
2.0
418
83
2
1068
31
17
15
35
1.91
29270--30301
238
4.3
237
82
3
1156
32
15
16
35
1.90
30702--30854
44
3.5
44
85
0
207
26
20
18
33
1.96
30702--30861
88
1.9
87
86
4
234
28
21
17
33
1.96
37862--37891
16
1.9
15
93
6
51
23
0
10
66
1.21
45770--45997
30
7.7
30
78
1
172
18
15
10
55
1.69
45795--45997
89
2.3
89
80
3
219
17
14
10
56
1.66
46217--46252
5
7.2
5
87
0
54
16
0
5
77
0.94
51200--51345
36
4.0
37
80
7
145
31
19
14
34
1.91
51225--51325
39
2.7
35
85
10
121
34
20
12
31
1.91
51168--51325
75
2.1
74
82
5
185
32
18
14
33
1.92
51471--51691
66
3.4
65
79
9
202
28
20
11
40
1.87
51715--52179
131
3.6
130
82
4
467
27
29
16
26
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52369--52441
3
24.3
3
83
10
96
36
2
0
60
1.11
52992--53016
9
2.8
9
100
0
50
88
0
12
0
0.53
53857--54057
30
6.8
29
76
6
147
18
13
9
57
1.63
53884--54055
59
2.9
60
85
1
238
17
13
9
59
1.60
56995--57045
21
2.3
23
83
12
72
11
23
0
64
1.26
63179--63255
30
2.5
30
83
12
86
20
2
0
76
0.90
63179--63251
8
9.2
8
82
5
60
20
2
0
76
0.90
63196--63257
4
16.2
4
73
20
53
20
3
0
75
0.94
64024--64057
9
3.8
9
84
0
50
64
0
17
17
1.29
64015--64055
18
2.3
18
86
0
55
70
0
17
12
1.16
64024--64058
18
1.9
18
100
0
70
62
0
17
20
1.32
66932--66971
16
2.6
15
85
14
55
65
5
0
30
1.14
68151--68272
22
5.5
22
91
0
199
27
28
27
16
1.97

Tables:   1

The End!