Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007081.1 Hibiscus syriacus cultivar Beakdansim tig00018479_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60309

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9347--9385
21
1.9
20
94
5
69
33
10
17
38
1.84
10122--10202
42
1.9
43
84
2
110
54
7
16
22
1.66
14011--14057
19
2.5
19
83
13
53
57
6
2
34
1.36
14018--14057
17
2.3
16
87
12
53
60
5
0
35
1.19
21141--21202
22
2.9
21
85
4
79
24
32
27
16
1.96
22679--22715
18
2.1
18
89
0
56
43
29
24
2
1.68
23957--23991
10
3.5
10
84
0
52
62
25
2
8
1.38
24483--24554
29
2.6
28
87
10
103
22
30
1
45
1.61
25084--25129
21
2.3
21
85
7
60
43
13
4
39
1.63
28588--28808
83
2.7
83
84
2
275
34
20
22
22
1.97
28588--28808
41
5.3
40
71
12
153
34
20
22
22
1.97
37598--37683
21
4.1
21
84
3
102
37
19
41
1
1.59
37606--37698
21
4.4
21
83
4
98
38
19
40
1
1.59
38051--38176
43
2.9
42
72
7
110
34
19
17
27
1.95
41529--41576
19
2.5
19
89
0
78
31
4
27
37
1.76
41590--41623
2
17.0
2
100
0
68
50
0
0
50
1.00
42080--42129
23
2.1
24
82
17
61
44
0
4
52
1.20
47747--47771
13
1.9
13
100
0
50
44
16
24
16
1.86
48354--48413
25
2.4
25
94
0
111
23
0
36
40
1.55
50920--50973
20
2.7
19
80
8
63
24
18
22
35
1.96
55425--55480
25
2.1
27
90
9
89
28
12
23
35
1.91
55664--55710
20
2.3
20
85
0
58
29
19
17
34
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55682--55720
20
2.0
20
84
0
51
30
23
17
28
1.97

Tables:   1

The End!