Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007087.1 Hibiscus syriacus cultivar Beakdansim tig00018489_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105433

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5804--5837
17
2.1
16
88
5
50
14
8
0
76
1.01
14744--14777
17
2.1
16
88
5
50
76
0
8
14
1.01
17258--17327
18
3.8
18
85
7
104
28
32
21
17
1.96
19324--19364
20
2.1
20
95
4
75
51
0
0
48
1.00
19629--19704
29
2.6
29
78
15
77
52
6
9
31
1.59
21877--21901
13
1.9
13
100
0
50
16
36
32
16
1.90
23960--24024
21
3.3
21
65
18
50
60
3
0
36
1.13
24935--25033
31
3.3
31
67
16
98
40
7
15
37
1.74
24912--25062
29
5.1
29
63
17
85
39
9
11
39
1.74
24912--25072
60
2.7
60
99
0
313
40
9
11
38
1.74
26225--26262
12
3.3
11
92
7
58
28
18
7
44
1.78
28975--29007
17
2.0
17
88
5
50
51
9
0
39
1.34
39890--39931
14
2.9
14
80
16
50
52
0
2
45
1.13
45196--45235
20
2.0
20
100
0
80
35
30
5
30
1.79
47800--47853
24
2.2
24
93
0
90
40
20
18
20
1.91
47800--47867
24
2.8
24
84
0
64
38
20
17
23
1.93
48734--48825
21
4.5
20
81
5
78
31
17
23
27
1.97
49351--49386
18
2.0
18
100
0
72
44
0
0
55
0.99
58930--58968
21
1.9
20
89
5
60
46
0
0
53
1.00
59190--59243
17
2.9
17
75
19
54
16
7
1
74
1.14
60872--60967
15
7.1
14
68
23
55
39
3
1
56
1.22
60909--60936
14
2.0
14
100
0
56
35
0
0
64
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64122--64178
22
2.6
22
94
0
105
31
22
7
38
1.81
71551--71584
16
2.1
16
88
0
50
14
8
20
55
1.65
75736--75797
18
3.2
20
78
19
62
61
0
1
37
1.06
75863--75904
22
1.9
22
85
9
59
64
2
0
33
1.07
76799--76836
18
2.1
18
95
0
67
42
0
18
39
1.50
83100--83145
23
2.0
23
100
0
92
26
17
17
39
1.91
85868--85922
26
2.1
26
100
0
110
20
3
21
54
1.59
86738--86958
122
1.8
123
88
3
338
26
12
17
43
1.84
90133--90207
37
2.0
37
100
0
150
29
10
13
46
1.76
96679--96707
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!