Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007088.1 Hibiscus syriacus cultivar Beakdansim tig00018503_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69940

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2583--2667
29
3.0
29
87
1
127
51
0
9
38
1.34
2584--2684
29
3.5
27
80
11
96
54
0
7
37
1.30
2602--2768
90
1.8
94
81
10
211
50
0
6
42
1.33
5558--5592
14
2.6
13
91
8
61
45
2
8
42
1.49
7374--7440
29
2.3
30
80
14
79
38
13
5
41
1.69
7761--7794
11
3.1
11
100
0
68
8
0
61
29
1.26
8539--8634
2
48.0
2
100
0
192
50
0
0
50
1.00
9284--9351
15
4.6
14
80
7
73
35
7
22
35
1.82
9219--9319
42
2.3
42
84
6
121
35
9
23
30
1.88
9244--9348
15
7.3
14
71
16
72
33
8
23
34
1.85
9424--9514
23
4.0
23
80
0
92
18
26
23
31
1.97
9985--10037
23
2.3
23
78
15
56
33
7
7
50
1.59
15302--15416
58
2.0
58
84
0
149
35
16
11
36
1.85
15779--15957
56
3.2
55
83
3
232
37
13
19
28
1.90
16731--16795
22
2.9
22
90
2
103
35
13
7
43
1.73
16775--16833
30
2.0
30
90
6
93
33
13
6
45
1.70
16874--16951
31
2.5
31
82
17
117
25
6
8
58
1.52
18833--18861
12
2.5
12
94
5
51
41
13
17
27
1.87
18899--18935
11
3.5
11
82
14
51
43
13
0
43
1.44
27812--27861
19
2.5
19
87
12
66
68
4
0
28
1.08
29171--29268
3
32.7
3
93
0
169
65
0
1
33
1.00
29563--30569
113
8.9
113
95
0
1766
28
19
14
36
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31130--31951
52
15.7
52
94
2
1382
37
22
15
24
1.93
32894--33004
1
111.0
1
74
0
87
0
13
0
86
0.57
32897--32978
36
2.2
36
89
2
119
0
18
0
81
0.69
40631--40672
18
2.4
17
88
11
59
69
2
0
28
1.01
41428--41461
18
1.9
18
94
5
61
70
5
0
23
1.09
42769--42878
3
36.7
3
94
0
193
65
0
0
33
0.99
44954--45003
2
25.0
2
100
0
100
50
0
0
50
1.00
60037--60093
23
2.5
23
97
0
105
56
22
5
15
1.60
65201--65252
27
1.9
27
84
0
68
42
11
7
38
1.70
65295--65348
27
2.0
27
92
0
90
35
1
12
50
1.52
67123--67161
20
1.9
20
84
5
51
7
35
5
51
1.53

Tables:   1

The End!