Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007089.1 Hibiscus syriacus cultivar Beakdansim tig00018510_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64955

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1539--1642
55
1.9
55
96
4
192
29
9
26
33
1.88
1546--1636
28
3.2
28
72
21
100
28
9
28
32
1.89
10961--11120
79
2.0
79
96
2
295
38
15
13
33
1.85
15801--15848
20
2.4
20
89
0
69
29
18
14
37
1.91
17369--17404
18
2.0
18
88
0
54
61
0
0
38
0.96
29905--29979
34
2.2
34
97
0
141
33
10
33
22
1.89
30966--31323
59
6.1
59
70
11
261
31
22
10
36
1.88
31039--31323
117
2.4
117
84
3
376
32
21
9
36
1.86
30966--31313
176
2.0
176
81
7
404
31
21
10
36
1.87
34529--34579
22
2.4
23
84
15
67
68
0
0
31
0.90
34528--34574
17
2.6
17
90
6
67
70
0
0
29
0.88
34835--35082
84
3.0
80
82
4
289
23
20
23
31
1.98
35263--36677
106
13.4
106
96
0
2483
23
18
24
33
1.97
35263--36677
423
3.3
423
95
0
2490
23
18
24
33
1.97
35263--36677
529
2.7
529
97
0
2659
23
18
24
33
1.97
41847--41880
17
1.9
18
94
5
61
67
0
0
32
0.91
42034--42086
22
2.4
22
81
6
63
20
18
20
39
1.92

Tables:   1

The End!