Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007093.1 Hibiscus syriacus cultivar Beakdansim tig00018521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109554

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--228
19
2.0
20
90
4
64
30
5
20
45
1.72
193--235
20
2.2
19
83
4
50
37
4
16
41
1.69
541--577
8
4.5
8
96
3
65
35
0
0
64
0.94
1078--1104
2
13.5
2
100
0
54
51
0
0
48
1.00
3674--3720
22
2.3
22
85
10
64
42
19
17
21
1.89
3760--3802
20
2.1
21
95
4
79
23
20
25
30
1.99
4463--4502
20
2.0
21
90
5
64
40
30
12
17
1.86
4433--4533
51
2.0
51
86
0
139
38
23
16
20
1.93
4486--4567
27
2.9
29
89
8
116
40
18
20
20
1.92
15776--15802
2
13.5
2
100
0
54
48
0
0
51
1.00
31098--31130
17
1.9
17
100
0
66
63
0
12
24
1.28
45234--45301
33
2.1
33
100
0
136
51
25
5
17
1.68
50595--50644
24
2.1
24
96
0
91
24
48
14
14
1.80
50880--50962
29
2.9
29
85
1
96
15
24
39
20
1.91
50917--51022
32
3.4
31
86
11
130
12
16
46
25
1.81
58918--59340
225
1.9
224
88
5
640
24
11
26
36
1.90
59147--59524
184
2.1
183
92
0
630
26
12
25
35
1.92
59344--59775
214
2.0
215
93
1
733
24
12
27
36
1.91
58926--59738
398
2.0
399
91
4
1314
25
11
26
36
1.90
59728--59813
38
2.3
37
85
2
118
13
11
38
36
1.82
59518--60285
254
3.0
252
92
4
1221
22
12
27
36
1.90
59982--60078
37
2.4
41
80
16
130
10
12
41
36
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59989--60071
37
2.2
37
95
0
148
10
12
40
36
1.77
60383--60430
17
2.8
17
80
3
60
35
2
4
58
1.29
62251--62306
26
2.2
26
81
12
62
46
17
10
25
1.80
64182--64233
26
2.0
26
100
0
104
26
11
19
42
1.85
69610--69645
14
2.6
14
91
4
56
22
13
2
61
1.46
69796--69840
23
2.0
23
86
8
65
35
2
2
60
1.22
70131--70187
8
7.0
8
73
11
53
33
33
3
29
1.75
72379--72430
20
2.6
20
100
0
104
25
11
26
36
1.90
72708--72738
2
15.5
2
100
0
62
48
0
0
51
1.00
72777--72831
22
2.5
21
82
8
65
41
1
3
52
1.29
84865--84971
53
2.0
53
98
0
205
27
9
19
43
1.81
88557--88590
16
2.1
17
94
5
61
29
8
0
61
1.26
88576--88646
36
2.0
35
83
5
90
47
1
1
49
1.18
89444--89488
17
2.7
17
80
16
58
53
0
6
40
1.27
89498--89526
13
2.1
14
93
6
51
34
0
0
65
0.93
103417--103450
15
2.3
15
94
0
59
32
32
20
14
1.93
103535--103615
29
2.8
29
96
3
146
17
22
16
44
1.86
103992--104148
64
2.5
63
77
14
169
26
17
19
37
1.93
104955--104981
14
1.9
14
100
0
54
37
18
14
29
1.91
105192--105221
7
4.3
7
95
0
51
43
30
0
26
1.55
108639--108666
14
2.0
14
100
0
56
28
14
28
28
1.95

Tables:   1

The End!