Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000710.1 Hibiscus syriacus cultivar Beakdansim tig00001379_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58736

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--87
15
2.6
15
95
4
69
28
0
5
65
1.14
1208--1253
20
2.3
19
85
14
58
52
8
13
26
1.69
11409--11454
20
2.3
19
85
14
58
52
8
13
26
1.69
17876--17921
21
2.3
19
89
10
74
17
10
2
69
1.27
18190--18274
39
2.2
39
100
0
170
29
41
4
24
1.75
20084--20190
48
2.2
48
100
0
214
28
5
20
45
1.73
20098--20174
24
3.2
24
66
20
70
29
6
20
42
1.77
40511--40546
16
2.2
16
100
0
72
44
5
13
36
1.68
51787--51835
19
2.4
21
83
10
57
32
6
8
53
1.55
53751--53786
14
2.6
14
91
4
56
30
5
16
47
1.70
58353--58458
56
1.9
56
82
3
133
35
10
13
40
1.78

Tables:   1

The End!