Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007103.1 Hibiscus syriacus cultivar Beakdansim tig00018559_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68766

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5787--5812
12
2.2
12
100
0
52
26
34
38
0
1.57
8125--8156
16
1.9
17
93
6
57
37
0
31
31
1.58
11366--11405
20
2.0
20
100
0
80
35
15
10
40
1.80
19245--19287
21
2.2
19
84
12
52
23
0
2
74
0.93
19371--19402
12
2.7
12
90
0
55
31
18
9
40
1.83
24413--24564
78
1.9
81
91
4
256
44
5
1
48
1.36
25289--25331
21
2.0
22
90
4
70
41
18
16
23
1.89
27510--27568
22
2.7
22
100
0
118
25
38
22
13
1.90
27433--27642
97
2.2
97
90
2
323
23
33
23
18
1.97
33452--33491
21
1.9
21
89
0
62
25
40
25
10
1.86
36132--36190
22
2.7
22
100
0
118
25
38
22
13
1.90
36055--36265
97
2.2
97
90
2
325
23
34
23
18
1.96
39417--39464
3
16.7
3
91
8
82
33
0
0
66
0.92
42294--42334
13
3.0
14
75
17
50
34
0
9
56
1.32
45867--45898
10
3.0
11
90
9
57
25
28
28
18
1.98
45892--45916
8
3.1
8
100
0
50
36
24
24
16
1.94
49958--50003
14
3.1
15
84
12
51
41
0
0
58
0.98
49967--50005
3
13.3
3
84
15
55
38
0
0
61
0.96
49967--50003
16
2.3
16
90
9
58
37
0
0
62
0.96
49967--50012
16
2.9
16
84
12
51
39
0
2
58
1.10
58080--58161
34
2.4
34
100
0
164
32
19
10
36
1.87
58142--58183
21
2.0
20
86
4
57
38
14
7
40
1.73

Tables:   1

The End!