Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007107.1 Hibiscus syriacus cultivar Beakdansim tig00018571_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64981

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4266--4294
13
2.1
14
93
6
51
58
0
6
34
1.25
6843--6916
32
2.3
32
86
2
114
36
13
16
33
1.88
17487--17543
19
2.9
19
75
14
62
66
1
8
22
1.29
17628--17745
22
5.3
21
71
19
71
65
0
5
28
1.20
17848--17893
17
2.7
17
77
16
51
67
4
10
17
1.37
17896--17946
5
9.8
5
76
16
50
60
0
3
35
1.15
17893--17943
21
2.3
21
83
10
57
60
0
3
35
1.15
17970--18001
10
3.4
10
87
12
50
68
0
0
31
0.90
18407--18504
37
2.6
37
88
0
133
30
14
14
40
1.85
19260--20536
106
12.0
106
90
0
1863
23
18
24
34
1.96
21392--21468
22
3.5
22
100
0
154
23
12
27
36
1.91
22085--22143
11
5.5
11
78
13
52
0
11
6
81
0.87
22094--22133
10
3.9
10
84
15
55
0
15
5
80
0.88
22073--22122
20
2.5
20
83
6
57
2
12
6
80
0.98
22071--22143
24
3.0
23
80
13
60
1
10
6
80
0.95
22094--22152
30
1.9
31
83
10
77
0
15
6
77
0.96
26434--26490
19
2.9
19
75
14
62
66
1
8
22
1.29
26574--26702
21
5.9
22
70
14
72
66
0
4
27
1.16
26840--26879
2
20.5
2
94
5
73
52
0
0
47
1.00
27373--27474
37
2.8
37
87
0
132
30
15
14
39
1.88
30427--30491
23
2.8
23
85
0
94
20
21
21
36
1.95
31345--31387
16
2.5
17
85
11
61
27
0
2
69
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35138--35269
45
2.9
45
90
0
201
30
21
8
40
1.82
38953--39084
45
2.9
45
95
0
228
31
21
7
39
1.82
42728--42753
13
2.0
13
100
0
52
38
7
7
46
1.61
46533--46612
16
5.1
16
74
19
71
62
5
7
25
1.42
55222--55322
42
2.3
45
75
13
113
39
16
11
31
1.85
55243--55362
42
2.8
43
81
6
138
36
15
14
33
1.88
55242--55398
42
3.8
41
75
12
124
33
16
14
35
1.89
55222--55429
83
2.5
85
77
9
203
36
17
13
32
1.90
56400--56426
13
2.1
13
100
0
54
40
7
14
37
1.74

Tables:   1

The End!