Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007116.1 Hibiscus syriacus cultivar Beakdansim tig00018601_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73145

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3430--3456
13
2.1
13
100
0
54
40
7
14
37
1.74
31704--31755
20
2.6
21
82
14
65
32
17
25
25
1.97
31743--31902
73
2.2
73
81
4
178
36
16
21
25
1.94
31869--31908
22
1.9
21
85
10
55
32
15
27
25
1.95
32180--33899
54
31.9
54
85
3
2034
29
18
19
32
1.95
32180--33862
323
5.2
324
84
3
2066
29
18
19
32
1.96
33228--33309
26
3.1
26
60
16
60
29
19
18
32
1.95
33796--34110
55
5.8
55
83
3
379
35
18
17
28
1.94
33796--34135
109
3.1
108
82
4
407
35
19
17
28
1.94
34275--34434
81
2.0
80
80
6
180
41
12
21
25
1.88
35631--35904
45
6.1
45
90
1
433
39
11
19
29
1.87
46800--46831
14
2.4
14
94
5
57
18
12
43
25
1.85
49901--50098
54
3.7
54
82
1
200
33
17
15
33
1.91
56209--56412
108
1.9
108
84
2
275
30
19
18
31
1.96
56209--56412
54
3.8
53
84
3
230
30
19
18
31
1.96
64830--64858
13
2.3
13
94
5
51
34
10
20
34
1.87
64836--64906
32
2.2
32
94
0
124
36
11
18
33
1.86
64986--65033
15
3.3
15
85
2
62
47
12
4
35
1.60
64978--65019
15
2.6
17
74
14
52
40
14
4
40
1.67
65081--65166
30
2.8
30
74
19
86
39
11
8
40
1.71

Tables:   1

The End!