Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000712.1 Hibiscus syriacus cultivar Beakdansim tig00001382_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63702

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5649--5692
20
2.1
21
91
4
72
34
20
9
36
1.84
6360--6399
20
2.0
20
95
0
71
37
12
10
40
1.77
9868--10224
183
2.0
183
82
2
439
21
25
15
36
1.93
16165--16741
5
115.0
5
87
10
810
40
0
1
57
1.09
17140--17182
21
2.1
21
87
12
63
60
16
16
6
1.56
24714--24750
2
18.5
2
88
0
56
51
5
0
43
1.24
24750--24776
2
13.5
2
100
0
54
51
48
0
0
1.00
30383--30727
7
47.4
7
69
23
173
40
1
6
51
1.37
30369--30745
20
18.4
21
69
22
170
40
1
6
51
1.37
30453--30745
5
57.6
5
70
22
141
39
1
5
53
1.33
30478--30733
18
14.0
17
71
21
105
40
1
4
52
1.33
42478--42529
25
2.1
25
88
0
77
34
13
7
44
1.72
46348--46441
4
23.8
4
83
10
113
30
0
69
0
0.89
46341--46457
8
14.2
8
75
18
80
33
0
66
0
0.92
46341--46457
12
9.5
12
78
9
83
33
0
66
0
0.92
46689--46737
3
16.3
3
91
0
80
30
2
2
65
1.15
46771--46829
21
2.8
20
77
7
64
32
35
22
10
1.87
47996--48031
19
1.9
18
88
5
54
33
0
2
63
1.08
61093--61170
27
2.9
26
90
5
113
28
28
19
24
1.98
61538--61588
20
2.5
20
93
0
84
43
13
17
25
1.86

Tables:   1

The End!