Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007120.1 Hibiscus syriacus cultivar Beakdansim tig00018605_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55951

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7468--7497
3
10.0
3
100
0
60
33
0
0
66
0.92
10796--10834
6
6.3
6
91
5
60
15
17
17
48
1.81
19353--19412
19
3.4
18
84
8
79
51
26
1
20
1.56
23641--23680
2
20.0
2
100
0
80
50
0
0
50
1.00
24550--24598
25
1.9
26
87
4
73
26
2
0
71
0.97
26187--26214
12
2.3
12
100
0
56
25
14
7
53
1.66
30280--30499
114
1.9
114
92
1
370
34
15
20
29
1.93
33013--33086
22
3.4
22
98
0
139
35
9
14
40
1.79
33764--34013
76
3.3
76
91
0
392
25
20
20
33
1.97
34048--34096
17
2.9
17
74
14
57
48
10
18
22
1.77
34048--34098
16
3.1
16
73
15
59
47
9
17
25
1.78
34154--34204
16
3.1
16
68
15
50
45
9
19
25
1.81
34038--34611
113
5.4
106
81
12
714
37
14
17
29
1.90
34214--34385
93
1.8
93
97
0
326
37
15
16
31
1.89
34307--34651
113
3.1
113
88
0
546
37
15
19
28
1.91
34974--35015
16
2.7
15
79
13
50
33
0
2
64
1.07
35068--35101
14
2.3
15
90
5
52
44
35
14
5
1.70
36104--36131
2
14.0
2
100
0
56
50
0
0
50
1.00
36726--36763
17
2.2
17
95
0
67
39
10
18
31
1.85
42382--42769
194
2.0
191
91
7
633
28
23
19
28
1.98
45435--45471
19
1.9
19
88
0
56
40
8
16
35
1.78

Tables:   1

The End!