Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007122.1 Hibiscus syriacus cultivar Beakdansim tig00018609_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63946

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1463--1602
56
2.4
57
82
9
176
32
16
18
32
1.93
5833--5953
38
3.3
37
73
13
126
22
15
23
38
1.92
8619--8663
21
2.1
22
87
4
65
33
24
28
13
1.93
10087--10214
32
4.0
32
83
8
154
35
23
15
25
1.94
14396--14451
22
2.7
20
78
10
67
23
28
23
25
1.99
14451--14578
32
4.0
32
77
13
122
33
21
17
26
1.96
17588--17782
71
2.8
71
92
0
320
25
14
24
35
1.93
17594--17786
34
5.4
38
75
12
176
24
15
24
36
1.93
20750--20847
48
2.0
48
98
0
187
29
12
25
32
1.92
25648--25673
12
2.2
12
100
0
52
38
0
23
38
1.55
52530--52634
29
3.5
30
76
7
88
41
1
7
48
1.42
52565--52634
30
2.3
30
85
2
86
41
2
11
44
1.55
52834--52924
29
3.2
29
82
1
103
45
10
6
37
1.66
52876--52937
29
2.1
29
82
5
72
46
6
6
40
1.55
56426--56459
18
1.9
18
88
5
52
41
14
0
44
1.45
56555--56646
29
3.1
28
75
16
71
43
1
8
46
1.41
56854--56927
29
2.6
29
86
0
94
43
6
9
40
1.64
61856--61998
74
1.9
74
94
0
250
39
18
16
25
1.90
63261--63309
20
2.4
21
89
3
73
20
30
32
16
1.94

Tables:   1

The End!