Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000714.1 Hibiscus syriacus cultivar Beakdansim tig00001386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53537

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104--152
23
2.1
23
85
7
64
22
2
16
59
1.47
6957--7030
20
3.2
24
70
18
75
14
16
0
68
1.20
10294--10343
24
2.1
24
85
7
66
22
2
16
60
1.46
12341--12370
2
15.0
2
100
0
60
50
0
50
0
1.00
12205--12503
151
2.0
153
90
2
478
38
14
23
24
1.91
12361--12620
133
2.0
133
93
0
448
36
16
19
26
1.93
12098--12618
284
1.8
287
88
2
805
36
15
20
26
1.93
24796--25502
54
13.3
54
79
5
661
24
26
25
23
2.00
29361--29394
2
17.0
2
100
0
68
50
0
0
50
1.00
29394--29427
2
17.0
2
100
0
68
50
0
50
0
1.00
30065--30098
6
5.7
6
100
0
68
0
50
35
14
1.44
30265--30316
25
2.0
25
85
3
68
73
0
3
23
1.00
30259--30324
26
2.4
27
78
14
73
68
1
3
27
1.13
40059--40103
21
2.1
21
83
0
54
37
4
2
55
1.32
41815--41882
30
2.3
30
100
0
136
33
26
7
32
1.84

Tables:   1

The End!