Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007140.1 Hibiscus syriacus cultivar Beakdansim tig00018675_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67449

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--872
7
18.3
7
69
13
56
75
1
6
16
1.07
741--870
16
8.1
16
68
12
70
76
1
6
15
1.05
789--869
22
3.7
22
78
14
64
77
1
3
17
0.97
788--872
7
12.1
7
74
12
59
77
1
3
17
0.97
2033--2217
37
5.3
37
74
17
137
46
5
3
44
1.42
2066--2335
34
7.6
38
69
17
129
44
5
4
45
1.47
2062--2248
37
5.3
36
76
15
117
47
4
3
44
1.42
2151--2320
70
2.4
75
76
16
182
42
6
4
46
1.48
2354--2384
15
2.1
15
93
0
53
70
0
3
25
1.02
2666--2729
29
2.2
29
83
8
78
46
6
15
31
1.71
5506--5549
19
2.3
19
84
0
52
50
4
15
29
1.64
5702--5782
37
2.1
37
90
4
126
27
4
16
51
1.64
9283--9327
23
2.0
23
86
0
63
33
22
15
28
1.95
11808--11881
31
2.4
31
84
8
89
13
27
31
28
1.94
11825--11895
31
2.3
31
82
0
79
15
30
29
23
1.95
14245--14284
16
2.8
13
82
17
53
22
20
20
37
1.94
15947--16017
31
2.2
32
85
7
92
15
25
32
26
1.95
17737--17792
23
2.4
23
93
0
94
35
19
12
32
1.89
21113--21175
19
3.4
18
75
14
56
41
6
17
34
1.75
21124--21179
18
3.1
18
76
5
58
41
7
17
33
1.77
21120--21192
37
1.9
38
86
8
105
39
5
19
35
1.75
21316--21381
21
3.3
21
70
12
75
24
7
18
50
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26120--26158
20
2.0
21
85
10
55
28
0
30
41
1.57
29541--29624
43
2.0
43
90
0
132
25
19
19
36
1.94
36187--36245
30
2.0
30
86
6
84
38
8
10
42
1.69
37657--37696
14
2.9
14
92
0
71
12
35
10
42
1.76
46107--46152
24
1.9
24
90
0
74
56
15
6
21
1.61

Tables:   1

The End!