Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007141.1 Hibiscus syriacus cultivar Beakdansim tig00018678_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48465

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2787--2829
18
2.4
18
88
7
61
83
4
9
2
0.87
2763--2829
18
3.6
19
74
6
57
80
4
11
2
0.97
4403--5677
106
12.0
106
91
0
1899
34
24
18
22
1.96
4403--5676
423
3.0
422
90
1
1976
34
24
18
22
1.96
7098--7182
35
2.5
32
75
17
82
32
3
2
61
1.26
7238--7267
8
3.6
8
95
4
51
23
0
0
76
0.78
18498--18531
17
1.9
18
94
5
61
52
0
5
41
1.25
27041--27149
50
2.2
50
93
0
182
19
28
25
26
1.99
29658--29748
24
3.8
24
82
2
112
27
16
18
37
1.92
29658--29748
47
1.9
48
86
2
130
27
16
18
37
1.92
29966--30029
2
32.5
2
96
3
121
48
0
0
51
1.00
34074--34117
3
14.7
3
95
0
79
31
0
36
31
1.58
34245--34278
14
2.4
14
90
9
52
20
2
5
70
1.21
34299--34380
33
2.5
34
86
6
114
15
2
13
68
1.32
34323--34372
21
2.3
21
79
3
55
16
2
10
72
1.21
38454--38510
30
1.9
30
100
0
114
40
3
33
22
1.71
42021--42056
17
2.1
17
100
0
72
30
5
30
33
1.81
45179--45279
40
2.5
39
90
6
157
33
16
14
34
1.90
45201--45268
21
3.3
21
74
15
79
35
19
11
33
1.88
45174--45291
19
6.0
19
70
20
82
33
16
14
36
1.89

Tables:   1

The End!