Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007143.1 Hibiscus syriacus cultivar Beakdansim tig00018680_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94151

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2897--3016
59
2.0
59
93
0
204
36
23
15
25
1.93
9866--9910
15
3.1
15
81
15
58
44
0
0
55
0.99
10267--10321
22
2.5
22
96
0
101
21
34
25
18
1.96
11149--11238
18
4.9
18
71
19
62
43
1
5
50
1.33
11745--11804
26
2.3
26
75
8
61
25
5
5
65
1.34
17577--17690
57
2.0
56
94
1
201
35
7
26
29
1.85
17972--17998
8
3.4
8
100
0
54
40
22
0
37
1.54
18559--18627
20
3.5
20
97
0
129
23
15
23
37
1.93
19270--19316
15
3.1
15
79
14
51
42
0
2
55
1.12
21765--21823
29
2.0
29
96
0
109
47
13
15
23
1.81
26452--26510
29
2.0
29
100
0
118
49
13
13
23
1.78
30732--30805
24
3.3
23
67
21
66
51
4
6
37
1.47
30718--30810
44
2.1
44
97
0
177
48
3
7
40
1.48
30718--30823
44
2.4
44
92
3
160
50
4
6
38
1.50
32987--33025
17
2.4
17
95
4
71
48
2
0
48
1.15
33437--33468
15
2.1
15
94
0
55
34
0
0
65
0.93
56436--56478
23
1.9
21
81
13
50
34
13
18
32
1.90
60104--60145
22
1.9
22
90
9
68
14
11
4
69
1.34
60475--60501
11
2.5
11
100
0
54
92
7
0
0
0.38
64801--64843
22
2.0
22
90
9
70
13
11
4
69
1.33
67258--67296
2
19.5
2
100
0
78
0
48
0
51
1.00
67296--67350
2
27.5
2
100
0
110
49
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80461--80534
38
1.9
39
83
8
98
66
2
6
24
1.29
80667--80713
25
2.0
23
83
8
58
59
0
4
36
1.17
80796--80828
12
2.8
12
82
17
50
54
0
18
27
1.44
82091--82462
106
3.5
105
81
10
464
22
18
25
33
1.97
83128--83300
64
2.6
67
87
5
228
35
9
20
34
1.85
83258--83376
36
3.3
36
80
4
141
36
15
19
28
1.92
85339--85476
69
2.0
69
92
2
233
26
15
21
36
1.94
85532--85599
26
2.7
26
76
13
70
4
17
2
75
1.10
88885--88985
49
2.0
50
83
12
129
73
0
4
20
1.08
88962--89047
39
2.2
40
83
8
113
66
1
4
27
1.19
89108--89153
15
2.9
15
83
6
56
60
0
4
34
1.16

Tables:   1

The End!