Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007144.1 Hibiscus syriacus cultivar Beakdansim tig00018682_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67040

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
902--935
17
2.0
17
88
0
50
14
2
29
52
1.56
14604--14642
19
2.1
19
95
0
69
20
38
15
25
1.92
14541--14704
65
2.5
64
83
7
181
29
26
17
26
1.98
14672--14741
19
3.7
19
100
0
140
31
30
21
17
1.96
20531--20586
22
2.7
21
83
10
62
30
23
17
28
1.97
22112--22155
21
2.1
21
86
0
61
9
36
15
38
1.80
23183--23221
19
2.1
19
90
0
60
20
35
15
28
1.93
23120--23328
65
3.2
63
80
8
188
29
25
17
27
1.97
23169--23329
65
2.5
65
83
3
191
30
26
16
27
1.96
24997--25072
29
2.6
30
77
10
77
46
6
11
35
1.67
25835--25876
19
2.2
19
95
0
75
40
9
26
23
1.85
29836--29903
31
2.2
32
86
2
93
27
20
4
47
1.69
34484--34513
15
2.0
15
93
0
51
70
0
3
26
1.03
35103--35150
23
2.1
23
88
0
69
22
12
6
58
1.57
36911--36953
14
2.9
15
82
10
52
62
2
2
32
1.20
37085--37159
33
2.3
32
83
2
96
52
1
4
42
1.28
40543--40569
2
13.5
2
100
0
54
51
0
0
48
1.00
40806--40856
23
2.2
23
85
0
66
13
17
13
54
1.70
52576--52613
20
1.9
20
89
10
60
13
31
34
21
1.91
55424--55464
21
2.0
21
85
9
57
14
31
31
21
1.94
56356--56412
22
2.6
22
86
8
73
28
19
24
28
1.98
60312--60365
2
27.5
2
96
3
101
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66473--66574
51
2.0
51
98
0
195
43
12
14
29
1.83

Tables:   1

The End!