Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007152.1 Hibiscus syriacus cultivar Beakdansim tig00018711_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60725

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1330--1425
31
3.1
31
80
8
115
34
22
16
26
1.95
5622--5717
31
3.1
31
80
3
86
34
22
17
25
1.96
7810--7930
59
2.1
59
95
0
215
46
2
16
34
1.61
8137--8176
21
1.9
21
84
0
53
47
2
17
32
1.61
8407--8596
95
2.0
95
88
2
283
33
14
25
26
1.94
8412--8632
95
2.3
95
84
6
252
33
14
24
27
1.94
9032--9598
79
7.1
79
90
2
875
36
11
22
29
1.89
9623--9756
59
2.3
59
88
7
193
35
11
18
35
1.87
10091--10285
81
2.4
81
92
0
336
40
8
22
28
1.83
10394--10439
2
23.5
2
95
4
85
47
0
0
52
1.00
15877--15921
11
4.1
11
85
5
56
15
11
2
71
1.24
22511--22552
22
1.9
22
90
9
68
14
11
4
69
1.34
34099--34151
24
2.2
24
81
12
65
58
11
15
15
1.63
36022--36076
23
2.3
25
84
6
78
60
12
18
9
1.58
38764--38816
24
2.2
24
84
12
74
58
13
15
13
1.64
40687--40741
23
2.3
25
84
6
78
60
12
16
10
1.60
43472--43521
25
2.0
24
85
11
66
76
2
14
8
1.10
48037--48076
21
1.9
21
85
10
55
25
12
17
45
1.83
48806--48865
30
2.0
31
86
3
86
28
8
10
53
1.63
49748--49799
21
2.6
21
90
6
81
34
13
5
46
1.67
50209--50247
19
2.1
19
90
9
62
20
15
0
64
1.30
53833--53878
20
2.5
20
86
10
62
39
10
4
45
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54274--54310
18
2.1
18
90
5
58
16
16
0
67
1.23
56245--56282
15
2.5
15
83
8
51
55
0
23
21
1.44
56870--56907
20
1.9
20
84
10
51
60
0
18
21
1.36
56930--56970
22
1.9
21
90
5
64
26
2
36
34
1.70
58192--58238
10
4.8
10
89
2
51
53
2
2
42
1.25
58210--58239
2
15.0
2
100
0
60
50
0
0
50
1.00
59989--60023
18
2.0
17
88
5
52
34
40
2
22
1.69

Tables:   1

The End!