Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007154.1 Hibiscus syriacus cultivar Beakdansim tig00018721_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73557

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1627--1695
26
2.6
26
81
2
75
53
4
4
37
1.41
1380--2163
324
2.4
321
86
8
1055
44
6
4
44
1.51
2683--2716
13
2.7
12
86
13
50
17
0
0
82
0.67
2682--2768
12
7.0
12
72
13
61
29
0
3
66
1.08
3845--3908
2
32.0
2
100
0
128
50
0
0
50
1.00
5990--6060
21
3.4
21
92
0
115
33
11
21
33
1.89
12646--12712
22
3.1
21
69
16
57
25
16
22
35
1.94
12644--13118
42
11.0
42
66
17
206
29
18
21
30
1.97
12682--12904
93
2.4
93
94
0
392
31
17
20
30
1.95
13496--13769
53
5.2
53
90
2
410
29
21
27
20
1.98
13509--13765
105
2.4
106
89
2
392
30
22
27
19
1.98
13929--13963
5
6.8
5
87
6
52
17
0
0
82
0.66
13929--13972
21
2.0
22
87
12
65
20
0
0
79
0.73
15114--15139
2
13.0
2
100
0
52
50
0
0
50
1.00
20992--21031
20
2.0
21
85
5
55
57
0
2
40
1.12
33176--33301
19
5.5
25
64
28
82
68
6
3
21
1.29
33136--33299
44
3.8
44
95
2
287
68
6
3
21
1.29
41519--41835
157
2.0
157
99
0
625
43
19
16
20
1.88
43283--43331
26
1.9
26
87
4
73
48
2
0
48
1.12
43329--44156
336
2.5
334
91
2
1297
44
6
4
44
1.51
47326--47363
13
2.6
14
88
12
51
44
0
0
55
0.99
48774--48809
19
1.9
18
88
5
54
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58331--58587
82
3.1
82
87
0
363
33
10
18
36
1.86

Tables:   1

The End!