Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007155.1 Hibiscus syriacus cultivar Beakdansim tig00018734_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91243

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24266--24366
22
4.5
22
70
7
85
39
0
9
50
1.36
24204--24321
15
7.5
15
81
13
139
45
0
2
51
1.14
24315--24394
18
4.4
18
65
27
53
35
0
13
51
1.42
24301--24784
54
8.8
54
83
7
616
35
0
12
51
1.42
24436--24478
22
2.0
22
95
0
77
34
2
13
48
1.56
24301--24786
166
3.0
163
80
10
621
35
0
12
51
1.42
24301--24730
86
5.1
82
73
16
330
35
0
12
51
1.43
24647--24725
18
4.4
18
68
17
65
36
0
11
51
1.38
24732--24814
14
5.1
17
67
21
70
31
0
12
56
1.36
24853--24879
14
1.9
14
100
0
54
40
0
0
59
0.98
27531--27581
15
3.4
15
80
0
57
13
62
15
7
1.52
27518--27569
26
2.1
26
85
7
72
15
61
15
7
1.55
33592--33650
30
1.9
31
89
3
93
44
8
8
38
1.65
33592--33675
29
2.8
30
82
8
91
42
8
13
35
1.74
36627--36664
17
2.2
17
90
0
58
21
5
0
73
1.02
37058--37087
15
2.0
15
93
0
51
6
36
16
40
1.75
40163--40376
18
11.7
18
84
4
268
27
15
11
45
1.81
41587--41642
3
18.7
3
88
0
85
30
64
0
5
1.16
46918--46998
32
2.5
32
95
2
117
22
24
25
27
2.00
52765--52931
3
55.7
3
86
0
217
0
39
0
59
1.02
53009--53036
3
9.3
3
100
0
56
32
0
0
67
0.91
61012--61039
2
14.0
2
100
0
56
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60580--61494
455
2.0
456
94
0
1609
36
4
20
38
1.74
61465--61525
2
31.0
2
91
3
97
49
1
0
49
1.10
61790--62978
602
2.0
602
96
0
2175
33
10
18
37
1.86
70524--70561
15
2.6
14
88
12
58
26
0
0
73
0.83
70738--70787
6
8.3
6
97
0
91
36
0
64
0
0.94
70785--70828
3
14.7
3
100
0
88
31
0
68
0
0.90
82887--82942
29
1.9
29
81
0
67
41
8
17
32
1.81
87718--87768
20
2.6
19
84
6
57
27
15
25
31
1.96

Tables:   1

The End!