Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007156.1 Hibiscus syriacus cultivar Beakdansim tig00018739_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59444

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--556
30
2.0
33
82
14
80
73
1
1
23
1.01
796--1421
109
5.7
111
86
7
827
28
19
15
37
1.91
789--1425
221
2.9
222
89
7
982
28
19
14
37
1.91
10183--10214
15
2.1
15
94
0
55
46
9
18
25
1.79
13513--13566
28
2.0
27
85
3
72
61
1
5
31
1.30
14294--14331
18
2.1
18
85
9
51
65
2
2
28
1.19
15789--15841
3
19.0
3
77
14
60
64
0
1
33
1.05
15789--15842
19
2.8
19
85
0
72
64
0
1
33
1.04
15789--15847
22
2.6
22
83
2
73
66
0
1
32
1.02
20410--20492
23
3.7
23
77
8
89
25
26
22
25
2.00
20583--20607
2
12.5
2
100
0
50
0
52
0
48
1.00
22806--22838
12
2.6
13
85
9
50
42
9
3
45
1.51
23133--23170
20
1.9
20
94
0
67
34
31
15
18
1.92
23181--23333
65
2.4
63
83
9
186
31
22
18
28
1.97
26052--26112
30
2.0
30
90
0
95
4
31
3
60
1.34
26426--26617
103
1.9
103
86
4
280
27
10
19
42
1.84
30697--30743
24
2.0
23
83
4
58
46
0
0
53
1.00
42976--43016
22
1.9
22
85
5
57
36
21
14
26
1.93
43061--43100
20
2.0
20
85
0
53
30
15
25
30
1.95

Tables:   1

The End!