Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007158.1 Hibiscus syriacus cultivar Beakdansim tig00018744_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76398

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--20250
7
2927.6
7
97
2
37355
41
43
0
14
1.49
20248--22420
7
312.4
7
98
1
4122
14
57
27
0
1.38
25583--25807
64
3.5
64
81
6
217
31
21
20
26
1.98
26115--26150
12
3.0
12
87
0
54
33
8
25
33
1.86
26166--26239
29
2.6
29
97
2
141
43
16
21
18
1.88
26324--26371
15
3.2
15
96
0
87
14
22
33
29
1.94
30361--30413
18
2.9
18
97
0
97
26
32
22
18
1.97
33076--33124
11
4.5
11
89
0
80
61
22
0
16
1.34
33258--33298
18
2.3
18
86
0
55
19
4
24
51
1.66
35365--35418
24
2.2
24
87
6
74
48
16
12
22
1.80
35550--35583
12
2.8
12
90
0
50
14
0
29
55
1.40
36351--36563
20
10.5
20
66
10
85
35
11
22
30
1.90
41676--41715
19
2.1
19
90
0
62
27
25
7
40
1.82
48665--48802
73
2.0
70
80
12
158
27
21
12
39
1.89
61164--61226
29
2.2
29
94
0
108
42
20
19
17
1.89
75480--75523
20
2.2
20
84
8
54
70
13
0
15
1.17

Tables:   1

The End!