Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007159.1 Hibiscus syriacus cultivar Beakdansim tig00018745_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49830

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3589--3622
15
2.3
15
89
0
50
55
0
2
41
1.15
15731--15793
29
2.2
29
94
0
108
42
20
19
17
1.89
30044--30087
20
2.2
20
84
8
54
70
13
0
15
1.17
33680--33903
64
3.5
64
82
4
249
33
20
19
27
1.96
34085--34414
164
2.0
164
100
0
660
33
7
21
37
1.81
34724--34976
31
8.2
31
95
0
461
38
11
15
33
1.84
37665--37888
64
3.5
64
83
6
242
33
20
18
28
1.96
38151--38188
19
2.0
20
89
5
60
26
2
23
47
1.65
38541--38724
31
5.9
31
97
0
350
38
11
15
33
1.85
39906--39971
3
22.0
3
81
6
80
31
1
1
65
1.11
48816--49082
80
3.4
81
92
6
442
27
12
22
38
1.90

Tables:   1

The End!