Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007164.1 Hibiscus syriacus cultivar Beakdansim tig00018775_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72492

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2608--2650
20
2.2
20
100
0
86
60
6
13
18
1.55
4988--5115
60
2.1
60
81
2
150
38
15
13
32
1.86
10596--10690
33
2.9
33
84
1
111
17
17
27
36
1.93
12965--13049
31
2.7
31
85
8
118
50
0
2
47
1.14
19007--19069
27
2.3
28
78
8
67
44
3
1
50
1.27
21718--21780
3
21.0
3
88
6
92
33
1
0
65
1.03
23781--23824
22
2.0
22
81
0
52
25
6
15
52
1.68
25287--25349
32
2.0
32
93
0
108
14
15
9
60
1.59
29526--29587
25
2.3
27
76
17
67
22
12
14
50
1.77
30487--30951
40
10.6
40
67
21
170
25
33
17
23
1.96
30519--30982
43
10.5
43
67
16
171
25
34
17
22
1.96
30468--30960
133
3.7
133
93
1
799
25
33
17
22
1.96
31160--31213
3
18.0
3
86
7
74
33
1
0
64
1.04
33191--33234
22
2.0
22
81
0
52
25
6
15
52
1.68
36070--36094
12
2.1
12
100
0
50
48
8
0
44
1.32
37137--37280
51
2.8
51
89
5
220
45
15
11
27
1.80
38719--38754
6
6.0
6
90
0
54
61
19
0
19
1.35
38719--38754
18
2.0
18
94
0
63
61
19
0
19
1.35
40499--40555
21
2.7
21
80
0
69
22
19
31
26
1.98
40917--40966
21
2.4
21
82
0
64
36
30
12
22
1.90
42502--42580
20
4.0
20
89
0
122
18
12
16
51
1.75
42907--42964
22
2.6
22
86
0
89
20
18
41
18
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44038--44070
16
2.1
16
88
5
50
24
24
9
42
1.83
44059--44096
20
1.9
20
94
0
67
26
28
10
34
1.90
48259--48329
2
35.5
2
100
0
142
50
0
0
49
1.00
48948--48999
16
3.2
17
72
22
58
42
0
21
36
1.53
55319--55354
2
18.0
2
100
0
72
50
0
0
50
1.00
55829--55863
2
17.5
2
93
0
61
48
2
0
48
1.16
66659--66696
3
12.3
3
94
5
67
34
0
0
65
0.93
67719--67789
30
2.3
31
90
2
108
21
11
18
49
1.78
71180--71217
6
6.7
6
93
6
62
31
52
15
0
1.43
71865--71918
21
2.6
21
93
0
90
24
22
24
29
1.99

Tables:   1

The End!