Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007166.1 Hibiscus syriacus cultivar Beakdansim tig00018783_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27564

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6326--6443
60
2.0
59
86
5
166
20
38
12
27
1.89
11508--11908
39
10.6
38
71
12
211
44
10
7
37
1.68
17982--18069
40
2.2
40
81
4
106
30
3
23
42
1.71
18572--18603
16
2.1
15
94
5
55
21
0
37
40
1.54
18563--18613
25
2.0
25
92
0
84
19
1
35
43
1.63
19469--19522
18
2.9
17
76
12
54
18
3
33
44
1.67
18052--20281
10
227.7
10
72
11
1051
21
5
29
43
1.76
19444--19711
99
2.7
99
79
5
265
19
6
30
43
1.77
20208--20260
16
3.1
16
78
13
52
16
3
33
45
1.66
20120--20260
36
3.7
36
77
12
95
18
5
31
43
1.73
23053--23232
42
4.3
41
86
8
240
22
16
24
36
1.94
23026--23232
21
10.0
21
68
16
101
23
17
24
35
1.95
23044--23232
84
2.3
82
89
5
281
23
16
24
35
1.94
25548--27564
7
303.7
7
79
13
704
14
19
46
19
1.84
26076--26370
20
14.6
20
86
12
408
14
25
58
1
1.43
26013--27564
7
236.6
7
82
14
1397
14
23
47
14
1.81

Tables:   1

The End!