Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007167.1 Hibiscus syriacus cultivar Beakdansim tig00018792_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51623

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1143
20
2.2
19
83
12
50
21
2
19
57
1.52
15570--15605
17
2.1
17
89
0
54
77
2
8
11
1.08
16769--17316
110
5.0
110
89
1
749
31
22
16
29
1.96
18767--18821
25
2.2
24
83
3
65
40
0
9
50
1.34
18921--18952
2
16.0
2
100
0
64
50
0
0
50
1.00
21210--21247
20
1.9
20
89
10
60
36
39
10
13
1.79
21635--21763
31
4.2
31
82
2
134
15
17
13
53
1.73
21877--21933
26
2.1
28
87
6
82
49
8
0
42
1.34
21889--21939
18
2.7
19
84
3
59
52
9
0
37
1.34
24462--24502
20
2.0
20
100
0
82
39
9
14
36
1.79
25464--25511
20
2.4
20
96
0
87
35
22
18
22
1.96
33373--33401
15
1.9
15
100
0
58
6
0
55
37
1.27
38097--38249
64
2.4
63
85
5
202
29
17
22
30
1.97
40496--40530
16
2.1
18
89
10
56
51
11
0
37
1.38
45663--45831
84
2.0
85
95
2
304
31
9
29
28
1.89
49479--49520
21
2.0
21
86
9
59
50
2
11
35
1.52

Tables:   1

The End!