Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007169.1 Hibiscus syriacus cultivar Beakdansim tig00018799_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51614

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13401--13469
26
2.7
26
81
0
84
34
5
20
39
1.76
18821--18889
21
3.3
21
95
0
129
27
11
49
11
1.74
20339--20394
21
2.5
22
85
11
78
35
7
0
57
1.26
21907--22265
186
1.9
187
81
6
433
41
7
12
37
1.72
23244--23290
19
2.5
19
96
0
85
38
6
2
53
1.39
24707--24806
8
12.1
8
71
10
58
75
2
6
17
1.10
24696--24815
26
4.5
26
73
15
93
73
1
5
20
1.11
24778--24815
12
3.2
12
78
14
51
73
0
0
26
0.83
24768--24819
20
2.6
21
81
9
63
73
0
0
26
0.84
26940--27082
58
2.5
58
90
0
223
27
15
23
33
1.95
26819--27200
182
2.2
173
84
7
475
24
16
24
34
1.95
27040--27270
118
2.0
118
88
1
347
23
16
24
35
1.95
28102--28131
13
2.4
12
89
10
51
0
16
0
83
0.65
28102--28131
6
4.8
6
92
8
51
0
16
0
83
0.65
38652--38686
14
2.5
14
90
0
52
71
2
5
20
1.19
38723--38765
18
2.3
19
84
4
52
60
4
0
34
1.17
41128--41152
10
2.5
10
100
0
50
32
12
20
36
1.89
41996--42038
20
2.2
20
86
0
59
34
13
16
34
1.88
49684--49733
21
2.3
21
82
6
64
16
24
0
60
1.36

Tables:   1

The End!