Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000717.1 Hibiscus syriacus cultivar Beakdansim tig00001389_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73196

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6630--6684
20
2.8
19
74
17
51
20
5
10
63
1.46
14642--15416
137
5.8
137
85
5
868
35
25
15
24
1.94
14781--15301
258
2.0
258
88
0
781
34
25
15
23
1.94
14918--15301
121
3.0
121
81
11
462
34
25
15
24
1.95
15576--15603
3
9.3
3
100
0
56
35
0
0
64
0.94
16680--16715
19
1.9
18
88
5
54
27
0
8
63
1.23
22593--22716
42
3.0
40
83
8
151
11
0
37
50
1.38
24787--24893
31
3.5
31
98
0
205
28
23
25
22
1.99
26257--26333
40
1.9
41
94
2
138
7
0
42
49
1.31
26306--26360
27
2.0
29
85
7
78
9
0
40
50
1.34
28878--28943
26
2.5
27
80
11
75
59
1
3
36
1.22
30786--30844
17
3.5
17
80
0
55
30
10
16
42
1.82
30814--30849
17
2.1
17
89
0
54
25
5
22
47
1.73
30902--30951
17
2.9
17
78
0
55
36
12
8
44
1.71
31939--31991
2
26.5
2
100
0
106
50
0
0
49
1.00
32421--32489
23
3.0
23
82
0
93
31
24
24
18
1.98
32719--32777
30
2.0
29
83
3
73
33
22
6
37
1.80
38234--38276
18
2.5
17
85
7
59
30
13
11
44
1.80
38351--38403
17
3.1
17
80
0
61
33
15
9
41
1.79
42093--42181
15
5.7
15
71
21
60
39
1
2
57
1.19
42111--42179
22
3.0
23
72
21
63
37
1
2
57
1.22
42156--42190
15
2.3
15
90
0
52
42
2
0
54
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43946--43993
24
2.0
24
95
0
87
35
25
6
33
1.81
46271--46302
2
16.0
2
100
0
64
50
0
0
50
1.00
46448--46481
15
2.3
15
94
0
59
52
8
5
32
1.56
49207--49239
9
3.7
9
84
15
50
21
0
0
78
0.75
49207--49239
14
2.5
13
95
5
57
21
0
0
78
0.75
50337--50416
35
2.3
35
89
4
117
43
22
1
32
1.61
50337--50432
35
2.7
35
80
6
106
41
27
2
29
1.67
50586--50873
148
2.0
143
89
3
441
36
6
10
46
1.65
51372--51449
35
2.2
36
86
2
104
34
1
21
42
1.61
55416--55512
26
3.6
26
73
17
81
16
22
11
49
1.77
55400--55508
55
2.0
55
85
3
148
15
22
11
51
1.74
56644--56704
26
2.3
26
100
0
122
14
26
6
52
1.66
56565--56673
55
2.0
55
80
3
121
16
22
10
51
1.74
57684--57713
2
15.5
2
93
6
53
46
0
0
53
1.00
57972--58002
16
1.9
16
100
0
62
51
19
6
22
1.69

Tables:   1

The End!