Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007171.1 Hibiscus syriacus cultivar Beakdansim tig00018808_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71190

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1051--1156
42
2.5
42
90
0
158
37
19
23
18
1.94
11903--11969
23
2.9
22
80
8
80
41
20
11
25
1.87
14805--14860
27
2.1
27
83
6
69
57
7
0
35
1.26
17705--17738
17
2.0
17
88
0
50
26
0
8
64
1.22
18511--18561
18
2.9
18
88
2
68
35
0
3
60
1.15
21601--21677
37
2.1
37
85
4
102
49
1
2
46
1.23
24093--24132
15
2.8
15
82
17
50
47
0
0
52
1.00
25047--25103
26
2.2
26
87
0
78
40
3
21
35
1.70
26081--26112
16
2.0
16
100
0
64
37
18
6
37
1.76
28355--28408
17
3.5
17
76
19
55
48
1
0
50
1.11
28666--28801
50
2.7
50
82
2
157
30
8
20
39
1.83
36226--36286
27
2.2
28
82
2
70
1
13
16
68
1.28
46538--46605
34
2.0
34
88
0
100
38
5
10
45
1.63
48438--48495
3
19.3
3
96
0
107
65
0
1
32
1.03
51352--51392
19
2.1
20
86
4
57
58
2
0
39
1.11
65640--65710
29
2.4
29
95
0
124
57
14
12
15
1.65
65640--65689
16
3.3
16
67
16
52
58
14
12
16
1.64
66453--66496
9
5.2
9
83
10
58
40
0
0
59
0.98
68014--68095
36
2.3
36
85
2
103
32
2
2
62
1.22
69732--69780
2
24.5
2
91
8
82
46
2
0
51
1.12
69982--70064
43
1.9
44
85
2
114
14
18
22
44
1.86
71096--71177
36
2.3
34
83
10
101
34
10
37
17
1.85

Tables:   1

The End!