Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007176.1 Hibiscus syriacus cultivar Beakdansim tig00018834_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51612

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
828--883
20
2.8
20
84
10
62
64
1
1
32
1.14
10326--10464
33
4.2
33
97
0
244
26
14
40
18
1.89
13605--13648
21
2.1
21
86
0
61
38
27
2
31
1.69
19179--19204
2
13.0
2
100
0
52
50
0
0
50
1.00
24566--24591
13
2.0
13
100
0
52
0
38
0
61
0.96
25598--25678
34
2.4
34
76
12
85
13
16
20
49
1.79
25611--25660
24
2.1
24
84
0
64
10
16
28
46
1.78
25621--25660
14
3.1
14
73
26
52
7
15
27
50
1.70
25621--25669
24
2.0
24
96
0
89
8
16
24
51
1.71
25627--25682
24
2.3
24
87
0
76
12
12
19
55
1.68
26720--26786
16
4.3
16
86
3
84
11
8
17
61
1.56
29116--29411
119
2.5
119
82
3
344
46
8
14
31
1.73
31733--31792
31
1.9
31
89
0
93
40
5
10
45
1.60
31806--32492
54
12.6
54
80
9
603
52
12
0
35
1.41
31838--31993
32
5.5
31
69
27
141
54
9
0
35
1.33
31870--31912
22
2.0
22
100
0
86
51
13
0
34
1.42
31872--31920
22
2.2
22
88
3
71
55
14
0
30
1.40
31927--31974
22
2.1
22
84
3
60
60
8
0
31
1.26
32008--32054
22
2.4
19
77
19
51
53
14
0
31
1.42
32026--32594
32
20.4
31
69
26
372
52
12
0
34
1.41
32090--32132
22
2.0
22
100
0
86
51
13
0
34
1.42
32092--32140
22
2.2
22
88
3
71
55
14
0
30
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32176--32218
22
2.0
22
100
0
86
51
13
0
34
1.42
32230--32272
22
2.0
22
100
0
86
51
13
0
34
1.42
32232--32280
22
2.2
22
88
3
71
55
14
0
30
1.40
32355--32400
22
2.3
20
85
14
60
56
10
0
32
1.34
31929--32574
188
3.4
188
86
5
834
52
12
0
34
1.41
32364--32406
22
2.0
22
100
0
86
51
13
0
34
1.42
32366--32414
22
2.2
22
88
3
71
55
14
0
30
1.40
31807--32492
306
2.3
296
86
7
1004
52
12
0
34
1.41
32418--32460
22
2.0
22
100
0
86
51
13
0
34
1.42
32420--32468
22
2.2
22
88
3
71
55
14
0
30
1.40
32577--32701
15
8.1
15
75
15
112
48
2
0
48
1.14
32617--32701
28
2.9
30
84
11
122
45
0
0
54
1.00
32503--32659
46
3.1
49
73
17
135
49
8
0
42
1.32
32617--32727
58
1.9
56
80
12
127
45
1
0
52
1.11
37329--37391
31
2.0
31
84
6
83
41
11
20
26
1.86
44282--44330
22
2.2
22
82
7
55
40
8
0
51
1.32
45202--45235
3
11.3
3
100
0
68
32
0
0
67
0.91
45706--45782
38
2.0
39
82
2
93
24
14
11
49
1.76

Tables:   1

The End!