Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007177.1 Hibiscus syriacus cultivar Beakdansim tig00018836_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66277

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15325--15404
32
2.5
32
82
8
83
6
11
17
65
1.45
15835--15935
17
5.6
18
75
15
84
56
4
1
36
1.32
15839--16098
5
51.6
5
65
23
77
51
5
3
39
1.43
15825--15946
17
6.7
19
73
18
82
54
4
2
38
1.35
15864--15946
24
3.2
24
78
18
87
53
4
1
40
1.30
15871--16100
7
31.7
7
66
23
77
50
5
3
40
1.43
16002--16100
26
3.8
25
74
20
78
53
6
3
37
1.41
16055--16098
16
2.7
16
80
16
54
56
4
0
38
1.20
15999--16098
39
2.5
41
80
9
125
53
6
3
38
1.41
21540--21570
12
2.6
12
100
0
62
9
51
0
38
1.35
28316--28343
2
14.0
2
100
0
56
50
0
0
50
1.00
42069--42155
43
2.0
44
97
2
167
32
29
14
22
1.94
48636--48660
13
1.9
13
100
0
50
48
8
8
36
1.62
49919--49960
22
2.0
22
81
13
52
40
4
0
54
1.21
54310--54369
30
2.0
30
93
0
102
58
10
10
21
1.60
61512--61536
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!