Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007179.1 Hibiscus syriacus cultivar Beakdansim tig00018855_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69243

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9359--9384
2
13.0
2
100
0
52
50
0
0
50
1.00
9852--9897
20
2.3
20
84
0
56
30
10
8
50
1.68
11702--11736
15
2.4
14
90
9
52
0
28
0
71
0.86
12572--12606
17
2.1
17
89
5
54
37
5
0
57
1.23
12580--12625
23
2.0
23
86
0
65
36
2
4
56
1.31
13234--13278
21
2.1
21
87
0
63
33
13
4
48
1.62
16771--16800
15
2.0
15
100
0
60
26
26
20
26
1.99
25496--25533
20
2.0
19
85
10
51
28
10
18
42
1.83
37310--37351
22
1.9
22
90
9
68
14
11
4
69
1.34
38818--38878
22
2.8
22
97
0
113
34
24
14
26
1.94
57452--57980
264
2.0
264
98
0
1031
33
16
16
33
1.92
61579--61647
36
1.9
35
82
8
86
52
11
11
24
1.71
62756--62791
15
2.3
16
85
9
56
52
0
0
47
1.00
67789--67822
17
2.0
17
100
0
68
47
11
29
11
1.76

Tables:   1

The End!