Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000718.1 Hibiscus syriacus cultivar Beakdansim tig00001390_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81108

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1871--1897
2
13.5
2
100
0
54
51
0
0
48
1.00
8466--8510
21
2.1
21
83
0
54
37
4
2
55
1.32
10216--10283
30
2.3
30
100
0
136
33
26
7
32
1.84
10384--10409
12
2.2
12
100
0
52
0
23
19
57
1.40
17709--17755
24
1.9
25
91
4
78
59
4
8
27
1.45
22313--22395
24
3.5
24
75
6
62
36
2
3
57
1.29
22404--22484
30
2.8
30
81
14
98
55
9
0
34
1.33
25319--25394
41
1.9
38
82
12
91
39
2
2
55
1.28
25899--25955
24
2.4
24
76
5
62
59
1
0
38
1.08
26085--26120
18
2.0
18
89
10
56
11
5
5
77
1.10
27089--27130
21
2.0
20
86
4
57
38
14
7
40
1.73
27132--27170
20
2.0
20
94
0
69
43
15
7
33
1.75
34023--34094
22
3.3
22
88
5
110
27
20
25
26
1.99
34031--34093
21
3.0
21
92
2
99
23
23
26
25
2.00
35468--35628
64
2.5
64
85
5
209
27
20
18
33
1.96
52785--52812
13
2.2
13
100
0
56
57
7
21
14
1.61
63603--63643
6
6.8
6
86
8
57
29
0
4
65
1.13
73905--74679
137
5.8
137
85
5
904
34
25
15
24
1.94
74181--74564
121
3.0
121
81
11
471
34
25
15
24
1.95
74044--74564
258
2.0
258
89
0
799
34
26
15
23
1.94
74836--74860
3
8.3
3
100
0
50
36
0
0
64
0.94
76474--76516
23
1.9
22
85
4
59
48
0
4
46
1.22

Tables:   1

The End!