Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007180.1 Hibiscus syriacus cultivar Beakdansim tig00018857_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50297

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1169--1201
9
3.8
9
92
8
59
42
0
0
57
0.98
1197--1260
3
21.7
3
84
9
87
60
0
1
37
1.06
1480--2026
223
2.5
222
89
5
802
28
19
13
38
1.90
1480--2026
111
4.9
112
90
4
815
28
19
13
38
1.90
2814--3090
90
3.1
92
96
3
517
35
22
13
28
1.92
2995--3202
113
1.8
113
96
0
389
33
21
12
32
1.91
3157--3384
83
2.8
83
95
2
397
35
25
13
25
1.93
4519--4562
1
44.0
1
86
0
61
0
6
0
93
0.36
4519--4560
11
3.8
11
93
6
68
0
7
0
92
0.37
4519--4562
17
2.7
17
93
6
74
0
6
0
93
0.36
15886--15932
13
3.5
13
77
13
51
55
2
2
40
1.24
17360--17417
3
19.3
3
92
0
98
62
0
1
36
1.06
18325--18354
2
15.0
2
100
0
60
50
0
0
50
1.00
22950--23009
31
1.9
31
96
0
111
31
10
18
40
1.84
32697--32794
44
2.1
47
87
7
139
26
11
22
39
1.87
42505--42581
16
4.6
18
72
18
69
75
0
18
6
1.01
42535--42576
7
5.7
7
83
10
57
76
0
14
9
1.02
42533--42576
23
2.0
22
90
4
70
75
0
15
9
1.05
42531--42590
16
4.0
16
81
10
65
76
0
15
8
1.00
43910--44469
51
10.8
51
84
7
594
29
15
25
29
1.96
44065--44147
27
3.2
27
60
13
66
30
15
22
31
1.95
44278--44471
55
3.6
55
82
8
168
30
15
22
30
1.95

Tables:   1

The End!