Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007181.1 Hibiscus syriacus cultivar Beakdansim tig00018863_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58875

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5006--5038
13
2.4
14
90
5
50
45
30
0
24
1.53
9204--9356
29
5.4
28
81
3
155
32
3
16
47
1.62
9204--9356
57
2.7
57
82
6
168
32
3
16
47
1.62
21450--21918
154
3.0
154
97
0
866
19
23
18
38
1.93
26314--26366
19
2.7
20
91
2
81
16
16
33
32
1.92
26702--26753
22
2.4
22
77
3
61
19
42
1
36
1.62
28175--28226
19
2.7
19
96
0
95
21
28
19
30
1.97
30718--31000
30
9.4
30
98
0
539
33
23
19
24
1.97
30986--31078
31
3.0
31
79
3
98
34
21
17
26
1.95
35312--35564
30
8.4
30
98
0
488
33
23
19
23
1.97
35550--35642
31
3.0
31
79
3
98
34
21
17
26
1.95
35873--35925
13
4.2
13
73
22
51
20
18
0
60
1.36
35993--36031
2
20.0
2
94
5
71
51
0
0
48
1.00
37602--37653
20
2.6
20
96
0
95
17
21
28
32
1.96
37641--37722
23
3.6
22
77
8
85
24
23
26
25
2.00
40961--41002
17
2.4
18
84
7
52
40
4
16
38
1.70
43155--43364
65
3.2
64
83
9
225
27
18
22
31
1.97

Tables:   1

The End!