Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01007184.1 Hibiscus syriacus cultivar Beakdansim tig00018897_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 123457
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Found at i:5281 original size:31 final size:31
Alignment explanation
Indices: 5244--5303 Score: 102
Period size: 31 Copynumber: 1.9 Consensus size: 31
5234 TTTTGTTTGC
*
5244 TTATTTATTCACAACGTTAGAATCCAAACGT
1 TTATTTAATCACAACGTTAGAATCCAAACGT
*
5275 TTATTTAATCACAATGTTAGAATCCAAAC
1 TTATTTAATCACAACGTTAGAATCCAAAC
5304 TTCTAACATC
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
31 27 1.00
ACGTcount: A:0.38, C:0.18, G:0.08, T:0.35
Consensus pattern (31 bp):
TTATTTAATCACAACGTTAGAATCCAAACGT
Found at i:8065 original size:38 final size:38
Alignment explanation
Indices: 8015--8097 Score: 159
Period size: 38 Copynumber: 2.2 Consensus size: 38
8005 CACTAACAAC
8015 TCCGA-GCATTAATGATCTCCCCTTAACAACAATCCCA
1 TCCGACGCATTAATGATCTCCCCTTAACAACAATCCCA
8052 TCCGACGCATTAATGATCTCCCCTTAACAACAATCCCA
1 TCCGACGCATTAATGATCTCCCCTTAACAACAATCCCA
8090 TCCGACGC
1 TCCGACGC
8098 CTTTATGCGA
Statistics
Matches: 45, Mismatches: 0, Indels: 1
0.98 0.00 0.02
Matches are distributed among these distances:
37 5 0.11
38 40 0.89
ACGTcount: A:0.30, C:0.37, G:0.10, T:0.23
Consensus pattern (38 bp):
TCCGACGCATTAATGATCTCCCCTTAACAACAATCCCA
Found at i:13957 original size:22 final size:22
Alignment explanation
Indices: 13912--13967 Score: 62
Period size: 22 Copynumber: 2.5 Consensus size: 22
13902 TGATCCAAAA
*
13912 TAATAAAAAATATTATTTTTATT
1 TAAT-AAAAATATTATTTTAATT
13935 TAATAAAAATATTGA-TTTAATT
1 TAATAAAAATATT-ATTTTAATT
13957 TAA-AAATAATA
1 TAATAAA-AATA
13968 ATATATAGAG
Statistics
Matches: 30, Mismatches: 1, Indels: 5
0.83 0.03 0.14
Matches are distributed among these distances:
21 3 0.10
22 22 0.73
23 5 0.17
ACGTcount: A:0.54, C:0.00, G:0.02, T:0.45
Consensus pattern (22 bp):
TAATAAAAATATTATTTTAATT
Found at i:21880 original size:22 final size:23
Alignment explanation
Indices: 21854--21912 Score: 84
Period size: 23 Copynumber: 2.6 Consensus size: 23
21844 AGAACCCCAG
21854 GGGGGTATCGATTCCCCTTCAAA
1 GGGGGTATCGATTCCCCTTCAAA
* * *
21877 GGGGGAACCGGTTCCCCTTC-AA
1 GGGGGTATCGATTCCCCTTCAAA
21899 GGGGGTATCGATTC
1 GGGGGTATCGATTC
21913 TCTCTGCCCT
Statistics
Matches: 30, Mismatches: 6, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
22 13 0.43
23 17 0.57
ACGTcount: A:0.19, C:0.25, G:0.32, T:0.24
Consensus pattern (23 bp):
GGGGGTATCGATTCCCCTTCAAA
Found at i:27704 original size:22 final size:21
Alignment explanation
Indices: 27676--27732 Score: 96
Period size: 22 Copynumber: 2.6 Consensus size: 21
27666 AAACCATTCA
27676 GGGGGAAATCGGTACCCCCTT
1 GGGGGAAATCGGTACCCCCTT
27697 GGGAGGAAATCGGTACCCCCTT
1 GGG-GGAAATCGGTACCCCCTT
27719 GGGGGAGAATCGGT
1 GGGGGA-AATCGGT
27733 TCCCTCTGGA
Statistics
Matches: 34, Mismatches: 0, Indels: 3
0.92 0.00 0.08
Matches are distributed among these distances:
21 6 0.18
22 28 0.82
ACGTcount: A:0.21, C:0.23, G:0.39, T:0.18
Consensus pattern (21 bp):
GGGGGAAATCGGTACCCCCTT
Found at i:28305 original size:17 final size:18
Alignment explanation
Indices: 28265--28386 Score: 128
Period size: 18 Copynumber: 6.9 Consensus size: 18
28255 TATTAGTCTA
28265 CATCTGATAACTGCTAAA-
1 CATCTGATAACTG-TAAAT
*
28283 CATCTGATATCTG-AAAT
1 CATCTGATAACTGTAAAT
*
28300 CATCTGATAACTGTCAAT
1 CATCTGATAACTGTAAAT
*
28318 -ATCTGATAACTGAAAAT
1 CATCTGATAACTGTAAAT
* *
28335 CATTTGATAATTGTAAAT
1 CATCTGATAACTGTAAAT
28353 -ATCTGATAACTGTGAAAT
1 CATCTGATAACTGT-AAAT
* *
28371 -GTCTGATAAATGTAAA
1 CATCTGATAACTGTAAA
28387 CATTTAGAAT
Statistics
Matches: 88, Mismatches: 12, Indels: 9
0.81 0.11 0.08
Matches are distributed among these distances:
16 3 0.03
17 41 0.47
18 44 0.50
ACGTcount: A:0.39, C:0.14, G:0.13, T:0.34
Consensus pattern (18 bp):
CATCTGATAACTGTAAAT
Found at i:28311 original size:35 final size:35
Alignment explanation
Indices: 28265--28386 Score: 140
Period size: 35 Copynumber: 3.5 Consensus size: 35
28255 TATTAGTCTA
* *
28265 CATCTGATAACTGCTAAACATCTGATATCTG-AAAT
1 CATCTGATAACTG-TAAATATCTGATAACTGAAAAT
*
28300 CATCTGATAACTGTCAATATCTGATAACTGAAAAT
1 CATCTGATAACTGTAAATATCTGATAACTGAAAAT
* * *
28335 CATTTGATAATTGTAAATATCTGATAACTGTGAAAT
1 CATCTGATAACTGTAAATATCTGATAACTG-AAAAT
* *
28371 -GTCTGATAAATGTAAA
1 CATCTGATAACTGTAAA
28387 CATTTAGAAT
Statistics
Matches: 75, Mismatches: 10, Indels: 4
0.84 0.11 0.04
Matches are distributed among these distances:
34 14 0.19
35 57 0.76
36 4 0.05
ACGTcount: A:0.39, C:0.14, G:0.13, T:0.34
Consensus pattern (35 bp):
CATCTGATAACTGTAAATATCTGATAACTGAAAAT
Found at i:28391 original size:52 final size:51
Alignment explanation
Indices: 28266--28391 Score: 148
Period size: 52 Copynumber: 2.4 Consensus size: 51
28256 ATTAGTCTAC
* *
28266 ATCTGATAACTGCTAAACATCTGATATCTGAAATCATCTGATAACTGTCAAT
1 ATCTGATAACTG-TAAACATTTGATATCTGAAATCATCTGATAACTGTAAAT
*
28318 ATCTGATAACTGAAAATCATTTGATAAT-TGTAAAT-ATCTGATAACTGTGAAAT
1 ATCTGATAACTGTAAA-CATTTGAT-ATCTG-AAATCATCTGATAACTGT-AAAT
* *
28371 GTCTGATAAATGTAAACATTT
1 ATCTGATAACTGTAAACATTT
28392 AGAATTCTTC
Statistics
Matches: 64, Mismatches: 6, Indels: 8
0.82 0.08 0.10
Matches are distributed among these distances:
51 3 0.05
52 39 0.61
53 22 0.34
ACGTcount: A:0.39, C:0.13, G:0.13, T:0.35
Consensus pattern (51 bp):
ATCTGATAACTGTAAACATTTGATATCTGAAATCATCTGATAACTGTAAAT
Found at i:38650 original size:51 final size:51
Alignment explanation
Indices: 38574--38676 Score: 145
Period size: 51 Copynumber: 2.0 Consensus size: 51
38564 TATGTCTGTT
* * *
38574 CAAATCACAATGGATGAATTAAAAACACACCCGAGCTCGAATCAGTCGGAC
1 CAAATCACAATGGATGAATTAAAAACAAACCAGAGCTCGAATCAGGCGGAC
* *
38625 CAAATCAC-ATGGGATGAATTTAAAACAAACCAGAGCTCGAGTCAGGCGGAC
1 CAAATCACAAT-GGATGAATTAAAAACAAACCAGAGCTCGAATCAGGCGGAC
38676 C
1 C
38677 GACAATTGAT
Statistics
Matches: 46, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
50 2 0.04
51 44 0.96
ACGTcount: A:0.40, C:0.24, G:0.20, T:0.16
Consensus pattern (51 bp):
CAAATCACAATGGATGAATTAAAAACAAACCAGAGCTCGAATCAGGCGGAC
Found at i:39295 original size:21 final size:21
Alignment explanation
Indices: 39253--39319 Score: 102
Period size: 21 Copynumber: 3.3 Consensus size: 21
39243 ACTATCGCAA
*
39253 TGCGATAGTCCAAGTT--CGT
1 TGCGATAGTCGAAGTTCGCGT
*
39272 TGCGATAGTTGAAGTTCGCGT
1 TGCGATAGTCGAAGTTCGCGT
39293 TGCGATAGTCGAAGTTCGCGT
1 TGCGATAGTCGAAGTTCGCGT
39314 TGCGAT
1 TGCGAT
39320 GGTGGTATTG
Statistics
Matches: 43, Mismatches: 3, Indels: 2
0.90 0.06 0.04
Matches are distributed among these distances:
19 14 0.33
21 29 0.67
ACGTcount: A:0.19, C:0.18, G:0.31, T:0.31
Consensus pattern (21 bp):
TGCGATAGTCGAAGTTCGCGT
Found at i:49445 original size:43 final size:43
Alignment explanation
Indices: 49379--49469 Score: 155
Period size: 43 Copynumber: 2.1 Consensus size: 43
49369 AAGTTCAAAA
*
49379 AATGAGTATTAAAATAGCAAGAAACAAATAAGAAACTGACGTG
1 AATGTGTATTAAAATAGCAAGAAACAAATAAGAAACTGACGTG
* *
49422 AATGTGTATTAAACTAGCAAGAAACAAATAAGAAACTGACTTG
1 AATGTGTATTAAAATAGCAAGAAACAAATAAGAAACTGACGTG
49465 AATGT
1 AATGT
49470 ACAACATATG
Statistics
Matches: 45, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
43 45 1.00
ACGTcount: A:0.51, C:0.10, G:0.18, T:0.22
Consensus pattern (43 bp):
AATGTGTATTAAAATAGCAAGAAACAAATAAGAAACTGACGTG
Found at i:56862 original size:17 final size:18
Alignment explanation
Indices: 56840--56873 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
56830 GTTAGGGTTG
56840 GGGATTT-AGAATTTTTA
1 GGGATTTGAGAATTTTTA
*
56857 GGGATTTGAGGATTTTT
1 GGGATTTGAGAATTTTT
56874 TGTAATTTTA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 7 0.47
18 8 0.53
ACGTcount: A:0.24, C:0.00, G:0.29, T:0.47
Consensus pattern (18 bp):
GGGATTTGAGAATTTTTA
Found at i:68656 original size:14 final size:15
Alignment explanation
Indices: 68624--68661 Score: 53
Period size: 14 Copynumber: 2.7 Consensus size: 15
68614 TTTAAATTAG
68624 GTAAAA-ATTTAAAA
1 GTAAAATATTTAAAA
*
68638 GTAAATTATTTAAAA
1 GTAAAATATTTAAAA
68653 -TAAAATATT
1 GTAAAATATT
68662 AATTATATTA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
14 13 0.62
15 8 0.38
ACGTcount: A:0.58, C:0.00, G:0.05, T:0.37
Consensus pattern (15 bp):
GTAAAATATTTAAAA
Found at i:68789 original size:23 final size:23
Alignment explanation
Indices: 68740--68802 Score: 65
Period size: 23 Copynumber: 2.8 Consensus size: 23
68730 AATATTTTAT
* *
68740 TTTAAATAATTTATATTTAAATT
1 TTTAAATAATTTATAATTAAATA
* *
68763 TTTAACTAATTTATAATTATATA
1 TTTAAATAATTTATAATTAAATA
* *
68786 TTT-AGTTATTTATAATT
1 TTTAAATAATTTATAATT
68803 TTAAATTATT
Statistics
Matches: 34, Mismatches: 6, Indels: 1
0.83 0.15 0.02
Matches are distributed among these distances:
22 12 0.35
23 22 0.65
ACGTcount: A:0.40, C:0.02, G:0.02, T:0.57
Consensus pattern (23 bp):
TTTAAATAATTTATAATTAAATA
Found at i:69563 original size:31 final size:31
Alignment explanation
Indices: 69518--69598 Score: 117
Period size: 31 Copynumber: 2.6 Consensus size: 31
69508 TGATTATATA
* * *
69518 AAATTCAATCATCATTTTACGATAATTTAAT
1 AAATTTAATGATCATTTTACAATAATTTAAT
*
69549 AAATTTAGTGATCATTTTACAATAATTTAAT
1 AAATTTAATGATCATTTTACAATAATTTAAT
*
69580 AAATTTAATGATTATTTTA
1 AAATTTAATGATCATTTTA
69599 TAGTTTTTAA
Statistics
Matches: 44, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
31 44 1.00
ACGTcount: A:0.42, C:0.07, G:0.05, T:0.46
Consensus pattern (31 bp):
AAATTTAATGATCATTTTACAATAATTTAAT
Found at i:71451 original size:15 final size:15
Alignment explanation
Indices: 71431--71464 Score: 59
Period size: 15 Copynumber: 2.3 Consensus size: 15
71421 TTGTCCTTTA
*
71431 TTATTGTTGTTGTTG
1 TTATTGTTGTAGTTG
71446 TTATTGTTGTAGTTG
1 TTATTGTTGTAGTTG
71461 TTAT
1 TTAT
71465 GGTTATTATT
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
15 18 1.00
ACGTcount: A:0.12, C:0.00, G:0.24, T:0.65
Consensus pattern (15 bp):
TTATTGTTGTAGTTG
Found at i:72991 original size:20 final size:20
Alignment explanation
Indices: 72968--73006 Score: 53
Period size: 20 Copynumber: 1.9 Consensus size: 20
72958 ATAAAAACGG
72968 CAAAAGAACA-AAAAAAATAC
1 CAAAA-AACATAAAAAAATAC
*
72988 CAAAAAACATAAGAAAATA
1 CAAAAAACATAAAAAAATA
73007 TGTCATAAAG
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
19 4 0.24
20 13 0.76
ACGTcount: A:0.74, C:0.13, G:0.05, T:0.08
Consensus pattern (20 bp):
CAAAAAACATAAAAAAATAC
Found at i:78764 original size:66 final size:65
Alignment explanation
Indices: 78652--78845 Score: 221
Period size: 66 Copynumber: 2.9 Consensus size: 65
78642 TAAGCTCAAG
* * * *
78652 CTGAGCACCAGATGGGAAAACTTCATTTGAGCT-TTTCTTTTGCACTTGACCATCAGATCTTTCT
1 CTGAGCACCATAT-GGAAAACTTCATTTGAGCTCTTCCTTTT-CACTTGACCATCAGAACTTTCA
78716 GA
64 GA
* * * *
78718 CTGAGCACCATATGAGAAAACTTCATTTGATCTCTGCCTTTTCACTTGACCATCAGAGCTTTGAG
1 CTGAGCACCATATG-GAAAACTTCATTTGAGCTCTTCCTTTTCACTTGACCATCAGAACTTTCAG
78783 A
65 A
* * * *
78784 CTGAGCACC-TGATGGAAAAACTTCATCTGAGCTCTTCTTTTTCACCTGACCATGAGAACTTT
1 CTGAGCACCAT-ATGG-AAAACTTCATTTGAGCTCTTCCTTTTCACTTGACCATCAGAACTTT
78846 TATGCAACAC
Statistics
Matches: 110, Mismatches: 14, Indels: 8
0.83 0.11 0.06
Matches are distributed among these distances:
65 3 0.03
66 101 0.92
67 6 0.05
ACGTcount: A:0.26, C:0.24, G:0.17, T:0.33
Consensus pattern (65 bp):
CTGAGCACCATATGGAAAACTTCATTTGAGCTCTTCCTTTTCACTTGACCATCAGAACTTTCAGA
Found at i:80335 original size:13 final size:14
Alignment explanation
Indices: 80305--80342 Score: 58
Period size: 14 Copynumber: 2.6 Consensus size: 14
80295 TATTTTTTTA
*
80305 TTTTAAAAAAATATT
1 TTTTAAAAATAT-TT
80320 TTTTAAAAATATTT
1 TTTTAAAAATATTT
80334 TTTTAAAAA
1 TTTTAAAAA
80343 AATCTGAAAG
Statistics
Matches: 22, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
14 11 0.50
15 11 0.50
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (14 bp):
TTTTAAAAATATTT
Found at i:83181 original size:25 final size:28
Alignment explanation
Indices: 83139--83191 Score: 67
Period size: 26 Copynumber: 2.0 Consensus size: 28
83129 CCGATCAGAT
*
83139 CCAACCCAAAAATCTATAT-C-CTCCAC
1 CCAACCCAAAAATATATATACTCTCCAC
*
83165 CCAACTCAAAAA-ATATATACTCTCCAC
1 CCAACCCAAAAATATATATACTCTCCAC
83192 TTGACTCCGT
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
25 5 0.22
26 12 0.52
27 6 0.26
ACGTcount: A:0.42, C:0.38, G:0.00, T:0.21
Consensus pattern (28 bp):
CCAACCCAAAAATATATATACTCTCCAC
Found at i:85039 original size:84 final size:84
Alignment explanation
Indices: 84898--85062 Score: 258
Period size: 84 Copynumber: 2.0 Consensus size: 84
84888 GGCAAGCAAA
* * *
84898 TTCAATCGGTGGCCGTCAATCTGTTTCTTCGGCACTTATGCGATCAAATTCTGCTATTTTGGGAT
1 TTCAATCGGTGGCCCTCAATCTGGTTCTCCGGCACTTATGCGATCAAATTCTGCTATTTTGGGAT
*
84963 CTCAGGGTGGTTCAATACC
66 CTCAAGGTGGTTCAATACC
* * * *
84982 TTCAATTGGTGGCCCTCAATCTGGTTCTCCGGCGCTTATGCGATCGAGTTCTGCTATTTTGGGAT
1 TTCAATCGGTGGCCCTCAATCTGGTTCTCCGGCACTTATGCGATCAAATTCTGCTATTTTGGGAT
85047 CTCAAGGTGGTTCAAT
66 CTCAAGGTGGTTCAAT
85063 GGCTCCAAAG
Statistics
Matches: 73, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
84 73 1.00
ACGTcount: A:0.18, C:0.22, G:0.24, T:0.36
Consensus pattern (84 bp):
TTCAATCGGTGGCCCTCAATCTGGTTCTCCGGCACTTATGCGATCAAATTCTGCTATTTTGGGAT
CTCAAGGTGGTTCAATACC
Found at i:96170 original size:61 final size:59
Alignment explanation
Indices: 96094--96242 Score: 169
Period size: 61 Copynumber: 2.5 Consensus size: 59
96084 AGTGGTTAAG
*
96094 TTTTCGGTGAATCTATGATCTATTCTTTTT-T-AGATCTCTATTTATTATAAAAGTCATTGAA
1 TTTTCAGTGAATCTATGATC-ATTCTTTTTGTCAG-TCTCTATTTATTATAAAA--CATTGAA
* *
96155 TTTTCAGTGAATCTATGATGAATT-TTTTTGTCAGTTTCTATTTATTATAAAACATTGAA
1 TTTTCAGTGAATCTATGAT-CATTCTTTTTGTCAGTCTCTATTTATTATAAAACATTGAA
* * *
96214 TTTTTATTAAATCTATGATCATTTCTTTT
1 TTTTCAGTGAATCTATGATCA-TTCTTTT
96243 GTTGCTTTCG
Statistics
Matches: 76, Mismatches: 7, Indels: 11
0.81 0.07 0.12
Matches are distributed among these distances:
58 1 0.01
59 25 0.33
60 9 0.12
61 39 0.51
62 2 0.03
ACGTcount: A:0.28, C:0.10, G:0.10, T:0.52
Consensus pattern (59 bp):
TTTTCAGTGAATCTATGATCATTCTTTTTGTCAGTCTCTATTTATTATAAAACATTGAA
Found at i:96227 original size:59 final size:60
Alignment explanation
Indices: 96094--96317 Score: 172
Period size: 60 Copynumber: 3.7 Consensus size: 60
96084 AGTGGTTAAG
* * * * * *
96094 TTTTCGGTGAATCTATGAT-CTATTCTTTTTTAGATCTCTATTTATTATAAAAGTCATTGAA
1 TTTTCAGTAAATCTATGATAAT-TTCTTTTGTAGCTTTCTATTTATTATAAAAG-CATTGAA
*
96155 TTTTCAGTGAATCTATGATGAATTT-TTTTGTCAG-TTTCTATTTATTATAAAA-CATTGAA
1 TTTTCAGTAAATCTATGAT-AATTTCTTTTGT-AGCTTTCTATTTATTATAAAAGCATTGAA
* * * * * * *
96214 TTTTTATTAAATCTATGATCATTTCTTTTGTTGCTTTCGATTTATTATAATACGGC--TGCA
1 TTTTCAGTAAATCTATGATAATTTCTTTTGTAGCTTTCTATTTATTATAA-A-AGCATTGAA
* * * * * *
96274 TTTTTAGTGAATATATGATCATTTCTTTTGTTGCTTTCGATTTA
1 TTTTCAGTAAATCTATGATAATTTCTTTTGTAGCTTTCTATTTA
96318 ATATCAATCA
Statistics
Matches: 140, Mismatches: 15, Indels: 17
0.81 0.09 0.10
Matches are distributed among these distances:
58 5 0.04
59 44 0.31
60 45 0.32
61 40 0.29
62 5 0.04
63 1 0.01
ACGTcount: A:0.26, C:0.11, G:0.12, T:0.51
Consensus pattern (60 bp):
TTTTCAGTAAATCTATGATAATTTCTTTTGTAGCTTTCTATTTATTATAAAAGCATTGAA
Found at i:113072 original size:2 final size:2
Alignment explanation
Indices: 113065--113089 Score: 50
Period size: 2 Copynumber: 12.5 Consensus size: 2
113055 ACCTCAAAAT
113065 TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA T
113090 TAAAGATAAA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 23 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Done.