Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007189.1 Hibiscus syriacus cultivar Beakdansim tig00018936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67714

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5853--5903
19
2.6
20
93
3
86
49
7
11
31
1.68
10004--10113
47
2.4
45
84
10
143
38
5
21
34
1.77
17061--17103
20
2.2
20
91
0
68
18
4
16
60
1.52
18148--18197
24
2.1
24
81
7
57
34
18
20
28
1.95
19429--19453
11
2.3
11
100
0
50
0
16
0
84
0.63
20119--20169
19
2.6
20
93
3
86
49
7
11
31
1.68
29738--29840
3
34.3
3
96
3
190
33
0
0
65
1.00
40358--40420
20
2.9
21
79
9
65
15
25
34
23
1.95
44232--44271
21
1.9
21
85
10
55
35
10
2
52
1.48
46606--46636
14
2.2
14
100
0
62
29
9
12
48
1.73
49720--49825
45
2.3
46
85
6
135
30
17
20
31
1.96
58432--58587
66
2.4
63
82
10
190
27
17
21
32
1.96
62825--62855
10
3.0
10
95
4
53
80
0
0
19
0.71
63364--63408
22
2.1
22
87
4
65
48
2
13
35
1.54

Tables:   1

The End!