Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000719.1 Hibiscus syriacus cultivar Beakdansim tig00001397_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74876

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--159
16
2.0
16
93
0
55
53
12
0
34
1.39
154--211
2
29.5
2
92
3
100
48
0
1
50
1.11
1188--1262
36
2.1
37
92
7
127
38
0
26
34
1.57
4187--4239
23
2.3
22
84
12
63
32
0
5
62
1.19
4547--4592
24
2.0
24
83
12
60
32
8
0
58
1.28
8416--8523
52
2.0
54
91
3
175
20
24
14
40
1.90
9813--9896
35
2.4
35
97
0
159
29
39
15
15
1.88
9886--9942
31
2.0
29
80
16
66
43
29
14
12
1.81
13482--13634
52
2.9
52
92
1
234
22
21
14
41
1.89
25846--25897
3
17.0
3
90
4
77
34
0
1
63
1.06
30223--30305
21
3.9
21
73
9
78
18
25
34
21
1.96
36867--36971
53
2.0
53
81
9
124
27
4
3
63
1.32
36923--36998
35
2.2
35
79
9
84
35
3
1
59
1.24
38243--38552
94
3.5
91
84
10
410
40
16
7
35
1.76
38407--38537
26
4.9
27
74
10
117
39
16
7
35
1.78
38383--38554
80
2.2
79
90
4
265
40
15
6
38
1.72
38510--38681
67
2.5
67
81
6
200
41
16
8
33
1.78
38952--39121
74
2.4
71
82
7
197
37
8
15
39
1.77
38759--39154
167
2.4
167
92
0
650
36
8
15
39
1.77
39090--39222
26
5.0
27
73
14
105
36
6
17
39
1.76
39073--39245
81
2.2
80
89
1
265
39
6
15
38
1.73
39159--39386
94
2.4
94
92
0
366
36
8
16
38
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45911--45958
3
16.3
3
86
4
71
29
0
4
66
1.10
45914--45958
23
2.0
23
90
0
72
28
0
4
66
1.11
47718--47766
21
2.3
21
96
0
89
26
16
14
42
1.86
48077--48135
22
2.7
22
80
15
68
57
0
3
38
1.15
58102--58152
26
2.0
26
92
0
84
41
9
19
29
1.84
59197--59276
39
2.1
38
84
9
101
46
2
13
37
1.57
60840--60892
12
4.7
12
77
13
58
54
0
41
3
1.18
60845--60887
21
2.0
22
86
4
61
58
0
37
4
1.19
64648--64686
14
2.5
17
76
24
57
53
7
33
5
1.51
64655--64687
14
2.4
14
100
0
66
51
6
36
6
1.51
66066--66632
178
3.0
189
84
7
658
40
13
14
30
1.86
65607--66653
381
2.8
374
82
5
1246
40
12
14
31
1.84
66616--66660
22
2.1
22
88
8
67
20
8
13
57
1.62
68724--68753
15
2.0
15
93
0
51
30
6
13
50
1.67
69107--69166
6
10.0
6
75
7
59
31
11
6
50
1.65
69133--69165
12
2.8
12
100
0
66
24
9
12
54
1.66
70638--72122
449
3.3
443
86
3
2048
42
13
13
30
1.83
73971--74006
19
1.9
19
88
5
56
47
8
22
22
1.77
74155--74227
36
2.0
36
84
10
96
47
4
1
46
1.30

Tables:   1

The End!