Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007191.1 Hibiscus syriacus cultivar Beakdansim tig00018953_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29467

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92--139
23
2.1
23
96
0
87
16
14
27
41
1.87
331--687
45
8.0
45
92
1
583
45
11
21
21
1.83
331--686
178
2.0
180
93
1
608
45
11
21
20
1.83
3988--4029
16
2.8
16
82
7
52
47
0
0
52
1.00
4096--4128
2
17.5
2
87
12
52
48
0
0
51
1.00
4096--4135
14
2.9
13
85
10
53
47
0
0
52
1.00
3449--4300
433
2.0
425
83
7
1083
39
10
9
40
1.72
10943--11006
23
2.8
22
73
4
56
29
23
25
21
1.99
11022--11341
103
3.1
103
94
0
570
37
23
13
25
1.91
11825--11861
19
1.9
19
88
0
56
10
29
35
24
1.89
11889--11931
21
2.0
21
81
0
50
16
20
25
37
1.93
17982--18034
23
2.3
23
86
0
70
30
24
24
20
1.99
17993--18045
23
2.3
23
80
0
61
28
22
28
20
1.99
18061--18381
103
3.1
103
95
0
597
37
23
12
26
1.91
18862--18899
20
1.9
20
88
0
58
10
31
34
23
1.89
18927--18969
21
2.0
21
86
0
59
13
25
27
32
1.94

Tables:   1

The End!