Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007192.1 Hibiscus syriacus cultivar Beakdansim tig00018955_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51112

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1167--1253
3
31.0
3
86
13
132
31
0
0
68
0.89
1167--1253
17
5.4
17
85
12
121
31
0
0
68
0.89
1167--1253
14
6.2
15
88
11
132
31
0
0
68
0.89
2805--2840
17
2.1
18
89
5
56
55
0
0
44
0.99
2557--2832
149
1.9
148
81
9
346
40
5
7
46
1.54
6598--6629
15
2.1
15
100
0
64
25
18
6
50
1.70
9826--9855
11
2.7
11
100
0
60
30
0
46
23
1.52
15344--15429
22
3.9
22
87
6
111
38
13
13
33
1.85
15827--16261
123
3.6
123
90
3
666
41
14
18
25
1.89
16634--16682
3
16.0
3
87
4
71
32
4
0
63
1.13
16634--16682
19
2.7
18
93
6
89
32
4
0
63
1.13
17929--17968
2
20.0
2
94
0
71
52
0
0
47
1.00
18226--18260
18
2.1
17
89
10
54
57
0
0
42
0.99
20698--20933
37
6.4
36
77
11
214
44
6
9
40
1.62
20698--20933
72
3.2
72
79
11
230
44
6
9
40
1.62
20734--20933
36
5.4
36
76
14
162
44
6
9
40
1.62
20973--21014
17
2.6
16
77
7
50
45
2
7
45
1.44
21005--21103
30
3.5
30
80
15
97
37
2
1
59
1.16
21010--21127
20
6.2
20
69
24
69
33
1
1
62
1.15
21010--21127
13
8.8
13
73
17
73
33
1
1
62
1.15
21024--21126
37
3.0
33
75
19
86
33
1
0
63
1.12
21105--21144
9
4.4
9
87
9
55
20
0
0
80
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21023--21136
20
6.1
19
72
16
78
31
1
0
65
1.08
21023--21127
30
3.4
31
77
12
101
33
1
0
63
1.11
21031--21143
19
5.6
19
69
21
61
30
1
0
67
1.07
22375--22413
19
2.1
18
85
4
51
25
7
0
66
1.18
22477--22581
48
2.1
50
89
6
162
27
7
0
64
1.20
31437--31472
2
18.0
2
94
0
63
50
2
0
47
1.15
32739--34040
509
2.6
506
93
2
2227
38
16
7
37
1.76
46636--46703
16
4.4
16
73
14
54
36
2
22
38
1.69
46619--46760
44
3.2
44
84
2
185
31
6
22
39
1.79
46837--46935
23
4.3
23
77
2
83
22
23
21
33
1.97
48518--48581
22
2.9
22
95
0
110
21
28
15
34
1.94
50655--51013
186
1.9
188
86
3
512
33
16
7
42
1.77

Tables:   1

The End!