Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007194.1 Hibiscus syriacus cultivar Beakdansim tig00018960_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74256

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16572--16716
76
1.9
76
87
5
204
27
2
11
58
1.44
17333--17375
17
2.4
18
84
3
61
25
6
0
67
1.15
30158--30189
3
10.7
3
100
0
64
65
0
0
34
0.93
32985--33055
17
4.1
17
73
7
54
40
11
11
36
1.77
33029--33075
20
2.5
18
87
12
76
42
14
6
36
1.72
33036--33075
20
2.0
20
100
0
80
40
15
5
40
1.68
37032--37074
17
2.5
17
84
0
59
41
4
11
41
1.62
37084--37124
20
2.0
20
100
0
82
41
14
9
34
1.79
43118--43160
20
2.3
19
84
8
52
37
6
30
25
1.82
45108--45237
70
1.9
68
82
6
163
46
9
2
42
1.48
52198--52238
21
2.0
20
86
9
57
34
0
7
58
1.26
52865--52919
2
27.5
2
100
0
110
49
0
0
50
1.00
53299--53335
19
1.9
19
94
0
65
29
18
18
32
1.96
53392--53473
36
2.3
36
91
0
128
19
24
23
32
1.97
58856--58894
19
2.1
19
90
4
62
30
0
2
66
1.05
64462--64526
22
3.2
19
75
14
67
35
15
20
29
1.93
67776--68252
56
8.6
56
89
2
732
35
12
18
33
1.89
67776--68252
111
4.3
112
93
2
759
35
12
18
33
1.89
73258--73325
28
2.4
30
76
14
72
27
8
0
63
1.24

Tables:   1

The End!