Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007195.1 Hibiscus syriacus cultivar Beakdansim tig00018966_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58454

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1090--1118
2
14.5
2
100
0
58
48
0
0
51
1.00
16190--16230
18
2.3
18
87
8
57
34
0
2
63
1.08
17393--17455
19
3.3
19
79
2
72
20
31
15
31
1.94
19892--20101
65
3.3
63
78
9
219
26
19
24
30
1.98
27560--27719
65
2.5
65
86
5
209
25
19
24
30
1.98
28007--28116
35
3.1
35
71
14
100
28
17
16
38
1.91
29807--29846
16
2.4
17
87
8
55
27
40
0
32
1.57
32214--32346
35
3.8
34
69
7
95
30
18
19
31
1.96
32212--32346
71
1.9
71
85
0
189
29
19
20
31
1.97
33861--34085
120
1.9
119
83
6
294
45
8
8
38
1.63
34180--34219
3
13.3
3
84
10
55
72
0
0
27
0.85
34180--34217
15
2.5
16
91
8
62
73
0
0
26
0.83
34180--34219
13
3.3
12
90
10
64
72
0
0
27
0.85
34674--34706
11
3.0
11
100
0
66
0
36
0
63
0.95
35871--36961
338
3.2
336
83
6
1324
28
18
14
38
1.90
35871--36979
225
4.9
228
82
6
1204
28
19
14
38
1.90
35871--36979
113
9.8
113
81
8
1137
28
19
14
38
1.90
36977--37208
76
3.1
76
89
0
383
34
21
20
23
1.96
37866--37940
22
3.4
22
88
3
105
37
14
10
37
1.81
42669--42713
17
2.7
17
86
3
56
8
15
0
75
1.03
42668--42714
16
2.7
18
80
9
62
8
14
0
76
1.01
42655--42743
46
1.9
47
84
6
119
5
16
3
74
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45561--45608
12
3.8
12
81
10
60
56
8
12
22
1.63
45561--45620
26
2.3
25
83
11
68
55
6
13
25
1.62
45667--45708
7
6.0
7
78
10
50
54
14
16
14
1.71
47152--47212
20
3.0
20
71
4
61
70
0
3
26
1.02
47735--47959
120
1.9
119
82
4
283
45
8
8
37
1.64
48052--48091
3
13.3
3
84
10
55
72
0
0
27
0.85
48052--48089
15
2.5
16
91
8
62
73
0
0
26
0.83
48052--48091
13
3.3
12
90
10
64
72
0
0
27
0.85
48559--48588
11
2.7
11
94
0
51
3
33
0
63
1.11
49373--49413
15
2.7
16
81
11
50
60
2
0
36
1.10
52873--52904
16
2.0
16
93
0
55
40
0
0
59
0.97
53347--53371
13
1.9
13
100
0
50
20
24
16
40
1.91

Tables:   1

The End!