Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007196.1 Hibiscus syriacus cultivar Beakdansim tig00018968_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63368

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1680--1743
32
2.0
32
96
0
119
12
20
17
50
1.78
6551--6626
36
2.1
36
85
7
100
47
1
3
47
1.29
13691--13723
16
2.0
17
88
5
50
30
6
30
33
1.82
29272--29297
13
2.0
13
100
0
52
61
38
0
0
0.96
29609--29658
14
3.6
14
86
0
73
12
12
16
60
1.60
29605--29658
28
1.9
28
92
0
90
11
12
16
59
1.61
29825--29912
23
3.8
23
76
8
88
15
11
13
59
1.62
36118--36226
46
2.3
46
98
1
209
31
24
18
25
1.98
42108--42157
21
2.4
21
96
0
91
36
28
16
20
1.93
50332--50513
59
3.1
56
73
15
161
34
21
3
40
1.70
50464--50520
29
2.0
29
83
10
73
33
15
3
47
1.63
50540--50706
60
2.8
59
77
5
174
38
5
19
35
1.77
51220--52633
187
7.7
185
80
7
1443
42
8
15
32
1.78
51220--52633
373
3.8
370
81
6
1593
42
8
15
32
1.78
54709--54784
22
3.5
22
96
0
134
35
15
27
21
1.94
54984--55051
33
2.1
32
83
2
82
17
14
25
42
1.87
56387--56485
23
4.3
23
77
2
74
33
21
23
22
1.97
56562--56703
44
3.2
44
84
2
185
39
22
6
31
1.79
56618--56686
16
4.5
15
68
15
52
37
21
2
37
1.69
56591--56702
14
7.6
14
68
21
61
37
23
6
33
1.80

Tables:   1

The End!